RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 FRMD8P1Q9BZ68 369 aaPredicted RBP14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 POLR1EQ9GZS1 481 aaKnown RBP14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 RSPH9Q9H1X1 276 aaPredicted RBP14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 SMARCAL1Q9NZC9 954 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 EVLQ9UI08 416 aaPredicted RBP14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 FBXO4Q9UKT5 387 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 DNPEPQ9ULA0 475 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 CACNA1IQ9P0X4 2223 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ZDBF2Q9HCK1 2354 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 C1QTNF3-AMACRE9PGA6 284 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 KIF2AO00139 706 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 MUSKO15146 869 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 KCNN4O15554 427 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 STK10O94804 968 aaKnown RBP14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 POP4O95707 220 aaKnown RBP14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 DNTTP04053 509 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PRNPP04156 253 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 HLA-DQB2P05538 268 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 RGRP47804 291 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 NUBP1P53384 320 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 RPS14P62263 151 aaKnown RBP14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 NSUN2Q08J23 767 aaKnown RBP eCLIP14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 CST6Q15828 149 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ARSIQ5FYB1 569 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 FAM46CQ5VWP2 391 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PGBD5Q8N414 524 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 SLC35B2Q8TB61 432 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ZNF419Q96HQ0 510 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 AGAP3Q96P47 875 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 FAM129BQ96TA1 746 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 IL12RB2Q99665 862 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 MGME1Q9BQP7 344 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 TPSD1Q9BZJ3 242 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 SCUBE2Q9NQ36 999 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 KLHL8Q9P2G9 620 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 AMACRQ9UHK6 382 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 TTC7AQ9ULT0 858 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ANKRD36A6QL64 1941 aa14.68□□□□□ -0.06
TNFRSF1A-216ENST00000543995 GOLGA6L10A0A0M3HER8 536 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 BCLAF3A2AJT9 711 aaKnown RBP14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 RNF103O00237 685 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 INSIG1O15503 277 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 GALR2O43603 387 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 LIASO43766 372 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 LEFTY1O75610 366 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ZNF189O75820 626 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ADH1BP00325 375 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 TUBB4AP04350 444 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 CTSLP07711 333 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PTPN3P26045 913 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 GKP32189 559 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 BYSLQ13895 437 aaKnown RBP14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 GRM3Q14832 879 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 SIX1Q15475 284 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 CCNG2Q16589 344 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 POM121L1PQ3SYA9 428 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 TTC31Q49AM3 519 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 TEX44Q53QW1 395 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 FAM182AQ5T1J6 154 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 SRLQ86TD4 932 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 RASSF3Q86WH2 238 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 MAML2Q8IZL2 1156 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PAF1Q8N7H5 531 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PIP4K2CQ8TBX8 421 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 GANCQ8TET4 914 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 TMEM121Q9BTD3 319 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 AP1M1Q9BXS5 423 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 HOMER3Q9NSC5 361 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 EBF1Q9UH73 591 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PPM1HQ9ULR3 514 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ZNF148Q9UQR1 794 aa14.67□□□□□ -0.06
TNFRSF1A-216ENST00000543995 TTC24A2A3L6 582 aaPredicted RBP14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 KPNA3O00505 521 aaPredicted RBP14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 AXIN1O15169 862 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 MID1O15344 667 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 GJB3O75712 270 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 UGT2B4P06133 528 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 SLC8A1P32418 973 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PAFAH1B1P43034 410 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 MAPK8P45983 427 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 CSNK1DP48730 415 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 NRLP54845 237 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 AP1S1P61966 158 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ZBTB16Q05516 673 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 DMWDQ09019 674 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 WASHC5Q12768 1159 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PID1Q7Z2X4 250 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 TMIEQ8NEW7 156 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PPP1R16AQ96I34 528 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 LRIG1Q96JA1 1093 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 NUDCD1Q96RS6 583 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 VAT1Q99536 393 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 OMDQ99983 421 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 SEMA3CQ99985 751 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 OSBPL1AQ9BXW6 950 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 DYRK4Q9NR20 520 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 SARDHQ9UL12 918 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 SCML1Q9UN30 329 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ATP8A1Q9Y2Q0 1164 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 WASF2Q9Y6W5 498 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms