RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 MYDGFQ969H8 173 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 SENP8Q96LD8 212 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 CCDC3Q9BQI4 270 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 MAN1C1Q9NR34 630 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 MRPL39Q9NYK5 338 aaKnown RBP13.25□□□□□ -0.29
TNC-212ENST00000542877 PEX11AO75192 247 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 NPR3P17342 541 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 BDNFP23560 247 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 FOLH1Q04609 750 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 ZNF549Q6P9A3 640 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 USP7Q93009 1102 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 SLC4A5Q9BY07 1137 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 FBXO6Q9NRD1 293 aaPredicted RBP13.25□□□□□ -0.29
TNC-212ENST00000542877 VPS45Q9NRW7 570 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 RAD18Q9NS91 495 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 CLIC5Q9NZA1 410 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 EHD3Q9NZN3 535 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 MEIS2O14770 477 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 TFEBP19484 476 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 MAPKAPK3Q16644 382 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 C18orf25Q96B23 403 aaPredicted RBP13.25□□□□□ -0.29
TNC-212ENST00000542877 OSBPL6Q9BZF3 934 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 ABHD16BQ9H3Z7 469 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 POLR1BQ9H9Y6 1135 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.25□□□□□ -0.29
TNC-212ENST00000542877 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.25□□□□□ -0.29
TNC-212ENST00000542877 ZNF624Q9P2J8 865 aaPredicted RBP13.25□□□□□ -0.29
TNC-212ENST00000542877 GMPPBQ9Y5P6 360 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 KIF20BQ96Q89 1820 aa13.25□□□□□ -0.29
TNC-212ENST00000542877 RECQL4O94761 1208 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 WARSP23381 471 aaKnown RBP13.24□□□□□ -0.29
TNC-212ENST00000542877 GSTM5P46439 218 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 PPIL2Q13356 520 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 FKBP1CQ5VVH2 108 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 VSIG10LQ86VR7 867 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 ZNF513Q8N8E2 541 aaPredicted RBP13.24□□□□□ -0.29
TNC-212ENST00000542877 KBTBD8Q8NFY9 601 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 ROBO3Q96MS0 1386 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 TCRBV9S1A1TA0A576 114 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 FAM47E-STBD1D6RA91 191 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 GUCY1B2O75343 617 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 BANF1O75531 89 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 CLK2P49760 499 aaKnown RBP13.24□□□□□ -0.29
TNC-212ENST00000542877 ATP12AP54707 1039 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 GNA13Q14344 377 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 NR1D2Q14995 579 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 FAM171A1Q5VUB5 890 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 ISLR2Q6UXK2 745 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 S100ZQ8WXG8 99 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 PLEKHG4BQ96PX9 1271 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 UXTQ9UBK9 157 aaPredicted RBP13.24□□□□□ -0.29
TNC-212ENST00000542877 CASZ1Q86V15 1759 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 LOC100506127A0A0U1RQW1 187 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 TRAFD1O14545 582 aaPredicted RBP13.24□□□□□ -0.29
TNC-212ENST00000542877 CYP7B1O75881 506 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 SEC24AO95486 1093 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 CALCAP01258 141 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 CATP04040 527 aaKnown RBP13.24□□□□□ -0.29
TNC-212ENST00000542877 CCNB1P14635 433 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 IDH2P48735 452 aaKnown RBP13.24□□□□□ -0.29
TNC-212ENST00000542877 TUFMP49411 452 aaKnown RBP13.24□□□□□ -0.29
TNC-212ENST00000542877 ZACNQ401N2 412 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 RBM44Q6ZP01 1051 aaKnown RBP13.24□□□□□ -0.29
TNC-212ENST00000542877 EIF3MQ7L2H7 374 aaKnown RBP13.24□□□□□ -0.29
TNC-212ENST00000542877 MAGEC3Q8TD91 643 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 KCTD4Q8WVF5 259 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 Q96MT0 163 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 CORO2BQ9UQ03 480 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 UBIAD1Q9Y5Z9 338 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 AP4B1Q9Y6B7 739 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 IRF8Q02556 426 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 RIPK1Q13546 671 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 SLC39A12Q504Y0 691 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 MFSD5Q6N075 450 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 KBTBD2Q8IY47 623 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 DEPDC4Q8N2C3 294 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 DNAJB14Q8TBM8 379 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 RCN3Q96D15 328 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 MAGEB10Q96LZ2 347 aaPredicted RBP13.24□□□□□ -0.29
TNC-212ENST00000542877 FHDC1Q9C0D6 1143 aaPredicted RBP13.24□□□□□ -0.29
TNC-212ENST00000542877 CDH19Q9H159 772 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 CLK4Q9HAZ1 481 aaKnown RBP13.24□□□□□ -0.29
TNC-212ENST00000542877 DPP7Q9UHL4 492 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 GNPTGQ9UJJ9 305 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 PXDNQ92626 1479 aa13.24□□□□□ -0.29
TNC-212ENST00000542877 SERPINA4P29622 427 aa13.23□□□□□ -0.29
TNC-212ENST00000542877 CD86P42081 329 aa13.23□□□□□ -0.29
TNC-212ENST00000542877 DMPKQ09013 629 aa13.23□□□□□ -0.29
TNC-212ENST00000542877 RFX4Q33E94 735 aa13.23□□□□□ -0.29
TNC-212ENST00000542877 TXNDC11Q6PKC3 985 aa13.23□□□□□ -0.29
TNC-212ENST00000542877 AFTPHQ6ULP2 937 aa13.23□□□□□ -0.29
TNC-212ENST00000542877 ALYREFQ86V81 257 aaKnown RBP13.23□□□□□ -0.29
TNC-212ENST00000542877 RTKNQ9BST9 563 aa13.23□□□□□ -0.29
TNC-212ENST00000542877 TTPAP49638 278 aa13.23□□□□□ -0.29
TNC-212ENST00000542877 USP46P62068 366 aa13.23□□□□□ -0.29
TNC-212ENST00000542877 SPESP1Q6UW49 350 aa13.23□□□□□ -0.29
TNC-212ENST00000542877 ANKRD52Q8NB46 1076 aa13.23□□□□□ -0.29
TNC-212ENST00000542877 UXS1Q8NBZ7 420 aa13.23□□□□□ -0.29
TNC-212ENST00000542877 UBE2E3Q969T4 207 aa13.23□□□□□ -0.29
TNC-212ENST00000542877 PRDM12Q9H4Q4 367 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms