RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 COPS7AQ9UBW8 275 aa6.38□□□□□ -1.39
DMD-228ENST00000541735 NUP153P49790 1475 aaKnown RBP6.38□□□□□ -1.39
DMD-228ENST00000541735 CPSF4LA6NMK7 179 aaKnown RBP6.38□□□□□ -1.39
DMD-228ENST00000541735 C9J4A7 227 aa6.38□□□□□ -1.39
DMD-228ENST00000541735 LIN7AO14910 233 aaPredicted RBP6.38□□□□□ -1.39
DMD-228ENST00000541735 MYL12BO14950 172 aa6.38□□□□□ -1.39
DMD-228ENST00000541735 SNPHO15079 494 aa6.38□□□□□ -1.39
DMD-228ENST00000541735 ZNF500O60304 480 aaPredicted RBP6.38□□□□□ -1.39
DMD-228ENST00000541735 MMP3P08254 477 aa6.38□□□□□ -1.39
DMD-228ENST00000541735 DEFA1P59665 94 aa6.38□□□□□ -1.39
DMD-228ENST00000541735 DEFA3P59666 94 aa6.38□□□□□ -1.39
DMD-228ENST00000541735 CREMQ03060 361 aa6.38□□□□□ -1.39
DMD-228ENST00000541735 PPATQ06203 517 aa6.38□□□□□ -1.39
DMD-228ENST00000541735 ACAD10Q6JQN1 1059 aa6.38□□□□□ -1.39
DMD-228ENST00000541735 FBXO42Q6P3S6 717 aa6.38□□□□□ -1.39
DMD-228ENST00000541735 ENPP7Q6UWV6 458 aa6.38□□□□□ -1.39
DMD-228ENST00000541735 KIAA0408Q6ZU52 694 aa6.38□□□□□ -1.39
DMD-228ENST00000541735 BEND5Q7L4P6 421 aa6.38□□□□□ -1.39
DMD-228ENST00000541735 SNX20Q7Z614 316 aa6.38□□□□□ -1.39
DMD-228ENST00000541735 TTC29Q8NA56 475 aaPredicted RBP6.38□□□□□ -1.39
DMD-228ENST00000541735 B3GALT6Q96L58 329 aa6.38□□□□□ -1.39
DMD-228ENST00000541735 RIT2Q99578 217 aa6.38□□□□□ -1.39
DMD-228ENST00000541735 LRRC1Q9BTT6 524 aa6.38□□□□□ -1.39
DMD-228ENST00000541735 RANBP17Q9H2T7 1088 aaKnown RBP6.38□□□□□ -1.39
DMD-228ENST00000541735 BRD7Q9NPI1 651 aa6.38□□□□□ -1.39
DMD-228ENST00000541735 RRAGDQ9NQL2 400 aaPredicted RBP6.38□□□□□ -1.39
DMD-228ENST00000541735 AGPAT3Q9NRZ7 376 aa6.38□□□□□ -1.39
DMD-228ENST00000541735 OGDHLQ9ULD0 1010 aa6.38□□□□□ -1.39
DMD-228ENST00000541735 KDM5AP29375 1690 aaKnown RBP6.37□□□□□ -1.39
DMD-228ENST00000541735 GMNCA6NCL1 334 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 SLC16A3O15427 465 aaKnown RBP6.37□□□□□ -1.39
DMD-228ENST00000541735 CATP04040 527 aaKnown RBP6.37□□□□□ -1.39
DMD-228ENST00000541735 ITGAVP06756 1048 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 TPBGLP0DKB5 382 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 ITPKAP23677 461 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 OMPP47874 163 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 TAS2R50P59544 299 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 ZNF445P59923 1031 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 CREB5Q02930 508 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 PRKCZQ05513 592 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 MPP3Q13368 585 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 ACAP1Q15027 740 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 CFAP206Q8IYR0 622 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 RACGAP1Q9H0H5 632 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 LRRC40Q9H9A6 602 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 BRF2Q9HAW0 419 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 TRMT13Q9NUP7 481 aaKnown RBP6.37□□□□□ -1.39
DMD-228ENST00000541735 TAS2R13Q9NYV9 303 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 RCOR1Q9UKL0 485 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 ZNF214Q9UL59 606 aaPredicted RBP6.37□□□□□ -1.39
DMD-228ENST00000541735 RPAP1Q9BWH6 1393 aaPredicted RBP6.37□□□□□ -1.39
DMD-228ENST00000541735 LRRC72A6NJI9 287 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 ZNF806P0C7X5 589 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 CYP11B2P19099 503 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 RCVRNP35243 200 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 HSD17B3P37058 310 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 GLUD2P49448 558 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 PPP2R2BQ00005 443 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 PCBP2Q15366 365 aaKnown RBP eCLIP6.37□□□□□ -1.39
DMD-228ENST00000541735 PFKFB4Q16877 469 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 BOLA3Q53S33 107 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 TREML2Q5T2D2 321 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 PDZK1Q5T2W1 519 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 WLSQ5T9L3 541 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 MB21D2Q8IYB1 491 aaPredicted RBP6.37□□□□□ -1.39
DMD-228ENST00000541735 SLC22A15Q8IZD6 547 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 CYP2W1Q8TAV3 490 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 TRMT10AQ8TBZ6 339 aaKnown RBP6.37□□□□□ -1.39
DMD-228ENST00000541735 PNPT1Q8TCS8 783 aaKnown RBP6.37□□□□□ -1.39
DMD-228ENST00000541735 KIAA1143Q96AT1 154 aaPredicted RBP6.37□□□□□ -1.39
DMD-228ENST00000541735 RGS17Q9UGC6 210 aaPredicted RBP6.37□□□□□ -1.39
DMD-228ENST00000541735 CDHR2Q9BYE9 1310 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 OR2AG2A6NM03 316 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 F8VP50 259 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 TAF4O00268 1085 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 GRM6O15303 877 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 MLLT3P42568 568 aaPredicted RBP6.37□□□□□ -1.39
DMD-228ENST00000541735 RANBP1P43487 201 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 CBX5P45973 191 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 GABPB1Q06547 395 aaPredicted RBP6.37□□□□□ -1.39
DMD-228ENST00000541735 C9orf64Q5T6V5 341 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 TRIQKQ629K1 86 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 SLC41A1Q8IVJ1 513 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 TMEM156Q8N614 296 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 UBR7Q8N806 425 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 FAM13CQ8NE31 585 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 ZMIZ2Q8NF64 920 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 CMTM5Q96DZ9 223 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 SYT17Q9BSW7 474 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 FAIM2Q9BWQ8 316 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 TRIM9Q9C026 710 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 DNAJC5Q9H3Z4 198 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 POMKQ9H5K3 350 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 FBXO6Q9NRD1 293 aaPredicted RBP6.37□□□□□ -1.39
DMD-228ENST00000541735 FTSJ1Q9UET6 329 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 SEPT3Q9UH03 358 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 RPS6KA6Q9UK32 745 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 ZNF862O60290 1169 aa6.37□□□□□ -1.39
DMD-228ENST00000541735 ECDO95905 644 aaPredicted RBP6.37□□□□□ -1.39
DMD-228ENST00000541735 CSH1P0DML2 217 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms