RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 SIX5Q8N196 739 aa28.21■■■□□ 2.11
CCM2-218ENST00000541586 AGGF1Q8N302 714 aaeCLIP28.21■■■□□ 2.11
CCM2-218ENST00000541586 GOLGA6L1Q8N7Z2 621 aa28.21■■■□□ 2.11
CCM2-218ENST00000541586 FBXO36Q8NEA4 188 aa28.21■■■□□ 2.11
CCM2-218ENST00000541586 MLPHQ9BV36 600 aaPredicted RBP28.21■■■□□ 2.11
CCM2-218ENST00000541586 GLOD4Q9HC38 313 aa28.21■■■□□ 2.11
CCM2-218ENST00000541586 FBRSL1Q9HCM7 1045 aaKnown RBP28.21■■■□□ 2.11
CCM2-218ENST00000541586 XAB2Q9HCS7 855 aaKnown RBP28.21■■■□□ 2.11
CCM2-218ENST00000541586 ARHGEF3Q9NR81 526 aa28.21■■■□□ 2.11
CCM2-218ENST00000541586 TTLL3Q9Y4R7 772 aa28.21■■■□□ 2.11
CCM2-218ENST00000541586 PRAMEF11O60813 436 aa28.21■■■□□ 2.11
CCM2-218ENST00000541586 SLC10A7Q0GE19 358 aa28.21■■■□□ 2.11
CCM2-218ENST00000541586 MESP2Q0VG99 397 aa28.21■■■□□ 2.11
CCM2-218ENST00000541586 MARC1Q5VT66 337 aa28.21■■■□□ 2.11
CCM2-218ENST00000541586 ASTLQ6HA08 431 aaPredicted RBP28.21■■■□□ 2.11
CCM2-218ENST00000541586 FIBINQ8TAL6 211 aa28.21■■■□□ 2.11
CCM2-218ENST00000541586 P2RY13Q9BPV8 354 aa28.21■■■□□ 2.11
CCM2-218ENST00000541586 ABCB8Q9NUT2 735 aa28.21■■■□□ 2.11
CCM2-218ENST00000541586 TEX264Q9Y6I9 313 aa28.21■■■□□ 2.11
CCM2-218ENST00000541586 KRBA1A5PL33 1030 aa28.2■■■□□ 2.1
CCM2-218ENST00000541586 NEBLO76041 1014 aa28.2■■■□□ 2.1
CCM2-218ENST00000541586 AP2A1O95782 977 aa28.2■■■□□ 2.1
CCM2-218ENST00000541586 OAS2P29728 719 aaKnown RBP28.2■■■□□ 2.1
CCM2-218ENST00000541586 HLA-FP30511 346 aa28.2■■■□□ 2.1
CCM2-218ENST00000541586 ELK3P41970 407 aa28.2■■■□□ 2.1
CCM2-218ENST00000541586 SPARCL1Q14515 664 aa28.2■■■□□ 2.1
CCM2-218ENST00000541586 KCTD11Q693B1 232 aa28.2■■■□□ 2.1
CCM2-218ENST00000541586 IL31Q6EBC2 164 aa28.2■■■□□ 2.1
CCM2-218ENST00000541586 IGDCC3Q8IVU1 814 aa28.2■■■□□ 2.1
CCM2-218ENST00000541586 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP28.2■■■□□ 2.1
CCM2-218ENST00000541586 TEX26Q8N6G2 289 aa28.2■■■□□ 2.1
CCM2-218ENST00000541586 NSMCE1Q8WV22 266 aa28.2■■■□□ 2.1
CCM2-218ENST00000541586 FAM3CQ92520 227 aa28.2■■■□□ 2.1
CCM2-218ENST00000541586 CHMP2BQ9UQN3 213 aa28.2■■■□□ 2.1
CCM2-218ENST00000541586 STK25O00506 426 aa28.19■■■□□ 2.1
CCM2-218ENST00000541586 ABHD2P08910 425 aa28.19■■■□□ 2.1
CCM2-218ENST00000541586 GLULP15104 373 aa28.19■■■□□ 2.1
CCM2-218ENST00000541586 CD70P32970 193 aa28.19■■■□□ 2.1
CCM2-218ENST00000541586 PRPSAP1Q14558 356 aa28.19■■■□□ 2.1
CCM2-218ENST00000541586 CCDC38Q502W7 563 aa28.19■■■□□ 2.1
CCM2-218ENST00000541586 DNAJC21Q5F1R6 531 aaKnown RBP28.19■■■□□ 2.1
CCM2-218ENST00000541586 GRAMD4Q6IC98 578 aa28.19■■■□□ 2.1
CCM2-218ENST00000541586 LRRC8BQ6P9F7 803 aa28.19■■■□□ 2.1
CCM2-218ENST00000541586 OXNAD1Q96HP4 312 aaPredicted RBP28.19■■■□□ 2.1
CCM2-218ENST00000541586 FCRL5Q96RD9 977 aa28.19■■■□□ 2.1
CCM2-218ENST00000541586 SPON2Q9BUD6 331 aa28.19■■■□□ 2.1
CCM2-218ENST00000541586 PDFQ9HBH1 243 aa28.19■■■□□ 2.1
CCM2-218ENST00000541586 FBXO10Q9UK96 956 aa28.19■■■□□ 2.1
CCM2-218ENST00000541586 F5P12259 2224 aa28.19■■■□□ 2.1
CCM2-218ENST00000541586 ERI2A8K979 691 aaKnown RBP28.18■■■□□ 2.1
CCM2-218ENST00000541586 DCXO43602 365 aa28.18■■■□□ 2.1
CCM2-218ENST00000541586 SUN1O94901 812 aa28.18■■■□□ 2.1
CCM2-218ENST00000541586 CISD3P0C7P0 127 aa28.18■■■□□ 2.1
CCM2-218ENST00000541586 MLNP12872 115 aa28.18■■■□□ 2.1
CCM2-218ENST00000541586 GPX6P59796 221 aa28.18■■■□□ 2.1
CCM2-218ENST00000541586 LMAN2Q12907 356 aa28.18■■■□□ 2.1
CCM2-218ENST00000541586 LEKR1Q6ZMV7 388 aa28.18■■■□□ 2.1
CCM2-218ENST00000541586 KLHDC8BQ8IXV7 354 aa28.18■■■□□ 2.1
CCM2-218ENST00000541586 ARL8AQ96BM9 186 aa28.18■■■□□ 2.1
CCM2-218ENST00000541586 SLC2A11Q9BYW1 496 aa28.18■■■□□ 2.1
CCM2-218ENST00000541586 UBP1Q9NZI7 540 aa28.18■■■□□ 2.1
CCM2-218ENST00000541586 KIAA1522Q9P206 1035 aaPredicted RBP28.18■■■□□ 2.1
CCM2-218ENST00000541586 NDRG2Q9UN36 371 aaKnown RBP28.18■■■□□ 2.1
CCM2-218ENST00000541586 TBC1D3BA6NDS4 549 aa28.18■■■□□ 2.1
CCM2-218ENST00000541586 MMP13P45452 471 aa28.18■■■□□ 2.1
CCM2-218ENST00000541586 OLIG2Q13516 323 aa28.18■■■□□ 2.1
CCM2-218ENST00000541586 RNF219Q5W0B1 726 aaPredicted RBP28.18■■■□□ 2.1
CCM2-218ENST00000541586 ZNF852Q6ZMS4 543 aa28.18■■■□□ 2.1
CCM2-218ENST00000541586 CAPN12Q6ZSI9 719 aa28.18■■■□□ 2.1
CCM2-218ENST00000541586 ATP11CQ8NB49 1132 aa28.18■■■□□ 2.1
CCM2-218ENST00000541586 SPATA22Q8NHS9 363 aa28.18■■■□□ 2.1
CCM2-218ENST00000541586 ACE2Q9BYF1 805 aaPredicted RBP28.18■■■□□ 2.1
CCM2-218ENST00000541586 MUC3BQ9H195 1237 aa28.18■■■□□ 2.1
CCM2-218ENST00000541586 VPS37BQ9H9H4 285 aa28.18■■■□□ 2.1
CCM2-218ENST00000541586 NT5MQ9NPB1 228 aa28.18■■■□□ 2.1
CCM2-218ENST00000541586 COL4A3Q01955 1670 aa28.17■■■□□ 2.1
CCM2-218ENST00000541586 GOLGA6L10A6NI86 522 aa28.17■■■□□ 2.1
CCM2-218ENST00000541586 PALM2-AKAP2B1ALY0 433 aaPredicted RBP28.17■■■□□ 2.1
CCM2-218ENST00000541586 KDELR3O43731 214 aa28.17■■■□□ 2.1
CCM2-218ENST00000541586 MYZAPP0CAP1 466 aa28.17■■■□□ 2.1
CCM2-218ENST00000541586 OXCT1P55809 520 aa28.17■■■□□ 2.1
CCM2-218ENST00000541586 LBRQ14739 615 aaKnown RBP28.17■■■□□ 2.1
CCM2-218ENST00000541586 KRT71Q3SY84 523 aa28.17■■■□□ 2.1
CCM2-218ENST00000541586 TMCO4Q5TGY1 634 aa28.17■■■□□ 2.1
CCM2-218ENST00000541586 RNF43Q68DV7 783 aa28.17■■■□□ 2.1
CCM2-218ENST00000541586 ZNF783Q6ZMS7 281 aa28.17■■■□□ 2.1
CCM2-218ENST00000541586 LRRC39Q96DD0 335 aa28.17■■■□□ 2.1
CCM2-218ENST00000541586 SIGLEC10Q96LC7 697 aa28.17■■■□□ 2.1
CCM2-218ENST00000541586 ZNF599Q96NL3 588 aa28.17■■■□□ 2.1
CCM2-218ENST00000541586 TMEM109Q9BVC6 243 aa28.17■■■□□ 2.1
CCM2-218ENST00000541586 TMBIM4Q9HC24 238 aa28.17■■■□□ 2.1
CCM2-218ENST00000541586 ATP13A1Q9HD20 1204 aa28.17■■■□□ 2.1
CCM2-218ENST00000541586 GGA2Q9UJY4 613 aa28.17■■■□□ 2.1
CCM2-218ENST00000541586 NCOR1O75376 2440 aa28.17■■■□□ 2.1
CCM2-218ENST00000541586 A0A087WUV0 522 aaPredicted RBP28.16■■■□□ 2.1
CCM2-218ENST00000541586 MAN2B1O00754 1011 aa28.16■■■□□ 2.1
CCM2-218ENST00000541586 RNF40O75150 1001 aa28.16■■■□□ 2.1
CCM2-218ENST00000541586 MZF1P28698 734 aaPredicted RBP28.16■■■□□ 2.1
CCM2-218ENST00000541586 EIF2DP41214 584 aaKnown RBP28.16■■■□□ 2.1
CCM2-218ENST00000541586 CSKP41240 450 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms