RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 CASP5P51878 434 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 HK3P52790 923 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 PLK1P53350 603 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 NNTQ13423 1086 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 FSCBQ5H9T9 825 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 MSANTD2Q6P1R3 559 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 Q6ZVU0 165 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 PIGZQ86VD9 579 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 APCDD1Q8J025 514 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 GPR156Q8NFN8 814 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 KIAA1524Q8TCG1 905 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 RAB7BQ96AH8 199 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 PRICKLE1Q96MT3 831 aaPredicted RBP9.65□□□□□ -0.86
YBX3-211ENST00000541351 ULBP1Q9BZM6 244 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 SDCBP2Q9H190 292 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 SEMA6CQ9H3T2 930 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 PANK4Q9NVE7 773 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 HMGXB4Q9UGU5 601 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 KCND3Q9UK17 655 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 PCDHGA9Q9Y5G4 932 aaKnown RBP9.65□□□□□ -0.86
YBX3-211ENST00000541351 OAS3Q9Y6K5 1087 aaKnown RBP9.65□□□□□ -0.86
YBX3-211ENST00000541351 DOCK9Q9BZ29 2069 aa9.65□□□□□ -0.87
YBX3-211ENST00000541351 NYNRINQ9P2P1 1898 aaKnown RBP9.64□□□□□ -0.87
YBX3-211ENST00000541351 GOLGA6L7A0A1B0GV03 622 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 FRMD3A2A2Y4 597 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 A6NCN8 305 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 ANKUB1A6NFN9 424 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 PRSS44E7EML9 344 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 MSI1O43347 362 aaKnown RBP9.64□□□□□ -0.87
YBX3-211ENST00000541351 EIF5BO60841 1220 aaKnown RBP9.64□□□□□ -0.87
YBX3-211ENST00000541351 RECKO95980 971 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 APOEP02649 317 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 DRD2P14416 443 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 PDGFRAP16234 1089 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 CAPN3P20807 821 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 KRT83P78385 493 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 MAP7Q14244 749 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 ARHGAP44Q17R89 818 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 C14orf28Q4W4Y0 310 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 RABGAP1LQ5R372 815 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 FAM129CQ86XR2 697 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 HID1Q8IV36 788 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 APLFQ8IW19 511 aaPredicted RBP9.64□□□□□ -0.87
YBX3-211ENST00000541351 MMP21Q8N119 569 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 EDEM1Q92611 657 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 SERPINB11Q96P15 392 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 SLC25A23Q9BV35 468 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 C1QTNF2Q9BXJ5 285 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 LRRC27Q9C0I9 530 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 ZMYND15Q9H091 742 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 TCEAL2Q9H3H9 227 aaPredicted RBP9.64□□□□□ -0.87
YBX3-211ENST00000541351 MRPL40Q9NQ50 206 aaKnown RBP9.64□□□□□ -0.87
YBX3-211ENST00000541351 IL36AQ9UHA7 158 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 SLC12A6Q9UHW9 1150 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 ZNF451Q9Y4E5 1061 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 TRPM6Q9BX84 2022 aa9.64□□□□□ -0.87
YBX3-211ENST00000541351 ANKHD1Q8IWZ3 2542 aaKnown RBP9.63□□□□□ -0.87
YBX3-211ENST00000541351 LOC101059948A0A1B0GTJ6 334 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 TCAF2A6NFQ2 919 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 RHPN2P1A8MT19 583 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 F5H5T6 163 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 K7EM74 188 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 ADRB3P13945 408 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 EIF4A3P38919 411 aaKnown RBP9.63□□□□□ -0.87
YBX3-211ENST00000541351 CYP2J2P51589 502 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 CLCN6P51797 869 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 LIMK2P53671 638 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 PEX6Q13608 980 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 AMZ1Q400G9 498 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 MCTP1Q6DN14 999 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 CHSY1Q86X52 802 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 LGI2Q8N0V4 545 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 CFAP52Q8N1V2 620 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 SCML4Q8N228 414 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 SH2D3CQ8N5H7 860 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 ANKRD52Q8NB46 1076 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 ATP11CQ8NB49 1132 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 OR4D9Q8NGE8 314 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 ZNF516Q92618 1163 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 CCDC74BQ96LY2 380 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 KLF6Q99612 283 aaPredicted RBP9.63□□□□□ -0.87
YBX3-211ENST00000541351 TRIM62Q9BVG3 475 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 REPIN1Q9BWE0 567 aaKnown RBP9.63□□□□□ -0.87
YBX3-211ENST00000541351 MFRPQ9BY79 579 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 CAAP1Q9H8G2 361 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 RDH14Q9HBH5 336 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 CHST11Q9NPF2 352 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 CNGB3Q9NQW8 809 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 HESX1Q9UBX0 185 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 VPS28Q9UK41 221 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 FADS3Q9Y5Q0 445 aa9.63□□□□□ -0.87
YBX3-211ENST00000541351 IGHV5-10-1A0A0J9YXX1 117 aa9.62□□□□□ -0.87
YBX3-211ENST00000541351 XPO1O14980 1071 aaKnown RBP9.62□□□□□ -0.87
YBX3-211ENST00000541351 SPTLC2O15270 562 aa9.62□□□□□ -0.87
YBX3-211ENST00000541351 RAD51BO15315 384 aa9.62□□□□□ -0.87
YBX3-211ENST00000541351 EXOC3O60645 756 aa9.62□□□□□ -0.87
YBX3-211ENST00000541351 ASS1P00966 412 aaKnown RBP9.62□□□□□ -0.87
YBX3-211ENST00000541351 TNFP01375 233 aa9.62□□□□□ -0.87
YBX3-211ENST00000541351 CLCN1P35523 988 aa9.62□□□□□ -0.87
YBX3-211ENST00000541351 STAT1P42224 750 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms