RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 KBTBD2Q8IY47 623 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 PACRGLQ8N7B6 248 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 CNTD1Q8N815 330 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 TNIP2Q8NFZ5 429 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 ITPKCQ96DU7 683 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 MCRS1Q96EZ8 462 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 CPB2Q96IY4 423 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 ZBTB45Q96K62 511 aaPredicted RBP10.56□□□□□ -0.72
CHFR-219ENST00000541341 B3GALT6Q96L58 329 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 NECTIN4Q96NY8 510 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 FAM193BQ96PV7 902 aaPredicted RBP10.56□□□□□ -0.72
CHFR-219ENST00000541341 RNF157Q96PX1 679 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 CPNE1Q99829 537 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 ADPGKQ9BRR6 497 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 PI4K2AQ9BTU6 479 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 CALN1Q9BXU9 219 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 ILKAPQ9H0C8 392 aaPredicted RBP10.56□□□□□ -0.72
CHFR-219ENST00000541341 CDT1Q9H211 546 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 POPDC2Q9HBU9 364 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 CISHQ9NSE2 258 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 ETNK2Q9NVF9 386 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 ARMCX1Q9P291 453 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 RCOR3Q9P2K3 495 aaPredicted RBP10.56□□□□□ -0.72
CHFR-219ENST00000541341 PPM1HQ9ULR3 514 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 PRG3Q9Y2Y8 225 aaPredicted RBP10.56□□□□□ -0.72
CHFR-219ENST00000541341 AP4S1Q9Y587 144 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 RAD54BQ9Y620 910 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 VWA8A3KMH1 1905 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 ZFHX2Q9C0A1 2572 aaPredicted RBP10.56□□□□□ -0.72
CHFR-219ENST00000541341 CCDC162PA2VCL2 907 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 ERI2A8K979 691 aaKnown RBP10.55□□□□□ -0.72
CHFR-219ENST00000541341 DPYSL4O14531 572 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 OGTO15294 1046 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 MAP3K13O43283 966 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 TIMM44O43615 452 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 TRMUO75648 421 aaKnown RBP10.55□□□□□ -0.72
CHFR-219ENST00000541341 TMEM63AO94886 807 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 PROCP04070 461 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 C8BP07358 591 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 CNPP09543 421 aaKnown RBP10.55□□□□□ -0.72
CHFR-219ENST00000541341 RALBP11234 206 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 COL6A2P12110 1019 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 ZNF12P17014 697 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 PSMC3P17980 439 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 PGAM1P18669 254 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 ME2P23368 584 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 SPRP35270 261 aaPredicted RBP10.55□□□□□ -0.72
CHFR-219ENST00000541341 MAGEA3P43357 314 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 CDK9P50750 372 aaKnown RBP10.55□□□□□ -0.72
CHFR-219ENST00000541341 STX5Q13190 355 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 PDAP1Q13442 181 aaKnown RBP10.55□□□□□ -0.72
CHFR-219ENST00000541341 MYBPC3Q14896 1274 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 MSS51Q4VC12 460 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 SPANXN3Q5MJ09 141 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 HP1BP3Q5SSJ5 553 aaPredicted RBP10.55□□□□□ -0.72
CHFR-219ENST00000541341 ANKRD22Q5VYY1 191 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 MBLAC2Q68D91 279 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 SCARA3Q6AZY7 606 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 ASTLQ6HA08 431 aaPredicted RBP10.55□□□□□ -0.72
CHFR-219ENST00000541341 AGMOQ6ZNB7 445 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 PDZD4Q76G19 769 aaPredicted RBP10.55□□□□□ -0.72
CHFR-219ENST00000541341 MRPL10Q7Z7H8 261 aaKnown RBP10.55□□□□□ -0.72
CHFR-219ENST00000541341 NT5DC4Q86YG4 428 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 UNC45BQ8IWX7 931 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 UBALD2Q8IYN6 164 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 DEFB107AQ8IZN7 70 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 PGAM4Q8N0Y7 254 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 CPSF7Q8N684 471 aaKnown RBP10.55□□□□□ -0.72
CHFR-219ENST00000541341 TRIML2Q8N7C3 387 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 GLIS1Q8NBF1 620 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 GSTCDQ8NEC7 633 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 SGF29Q96ES7 293 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 CFAP36Q96G28 342 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 DCUN1D1Q96GG9 259 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 PPP1R2P1Q96PQ5 205 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 KLHL5Q96PQ7 755 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 PLEKHG4BQ96PX9 1271 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 TRIM56Q9BRZ2 755 aaKnown RBP10.55□□□□□ -0.72
CHFR-219ENST00000541341 YTHDF1Q9BYJ9 559 aaKnown RBP10.55□□□□□ -0.72
CHFR-219ENST00000541341 SNX25Q9H3E2 840 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 MAGEE1Q9HCI5 957 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 TOPORSQ9NS56 1045 aaPredicted RBP10.55□□□□□ -0.72
CHFR-219ENST00000541341 DZANK1Q9NVP4 752 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 DNAAF2Q9NVR5 837 aaKnown RBP10.55□□□□□ -0.72
CHFR-219ENST00000541341 MOCS1Q9NZB8 636 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 RSL24D1Q9UHA3 163 aaKnown RBP10.55□□□□□ -0.72
CHFR-219ENST00000541341 ZNHIT2Q9UHR6 403 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 FAF1Q9UNN5 650 aaPredicted RBP10.55□□□□□ -0.72
CHFR-219ENST00000541341 DNAJC16Q9Y2G8 782 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 SH3GLB1Q9Y371 365 aa10.55□□□□□ -0.72
CHFR-219ENST00000541341 FRYLO94915 3013 aa10.54□□□□□ -0.72
CHFR-219ENST00000541341 TRPC5OSA6NMA1 111 aa10.54□□□□□ -0.72
CHFR-219ENST00000541341 PIK3R2O00459 728 aa10.54□□□□□ -0.72
CHFR-219ENST00000541341 NRP1O14786 923 aa10.54□□□□□ -0.72
CHFR-219ENST00000541341 INPPL1O15357 1258 aa10.54□□□□□ -0.72
CHFR-219ENST00000541341 KCNN4O15554 427 aa10.54□□□□□ -0.72
CHFR-219ENST00000541341 PSMD3O43242 534 aa10.54□□□□□ -0.72
CHFR-219ENST00000541341 MTSS1O43312 755 aa10.54□□□□□ -0.72
CHFR-219ENST00000541341 PLIN3O60664 434 aa10.54□□□□□ -0.72
CHFR-219ENST00000541341 COQ9O75208 318 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms