RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ZNF668Q96K58 619 aaPredicted RBP12.78□□□□□ -0.36
DDX55-206ENST00000539934 TMEM68Q96MH6 324 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 C17orf80Q9BSJ5 609 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 ADGRE2Q9UHX3 823 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 SNX12Q9UMY4 172 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 VPS4AQ9UN37 437 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 DTX4Q9Y2E6 619 aa12.78□□□□□ -0.36
DDX55-206ENST00000539934 FAM172BPA6NC97 362 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 BTNL10A8MVZ5 291 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 PRSS44E7EML9 344 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 hCG_2039718K7EN88 272 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 PSMD9O00233 223 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 DNAJC6O75061 913 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 PALMO75781 387 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 SNAPINO95295 136 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 ZNF286BP0CG31 522 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 KRT5P13647 590 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 INSRRP14616 1297 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 HCAR3P49019 387 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 PTPN5P54829 565 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 FRG1Q14331 258 aaKnown RBP12.77□□□□□ -0.36
DDX55-206ENST00000539934 PLA2G4EQ3MJ16 856 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 ZBTB33Q86T24 672 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 FBXL6Q8N531 539 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 ALLCQ8N6M5 410 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 SLC2A14Q8TDB8 520 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 GRK7Q8WTQ7 553 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 JPH3Q8WXH2 748 aaPredicted RBP12.77□□□□□ -0.36
DDX55-206ENST00000539934 RELTQ969Z4 430 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 EMID1Q96A84 441 aaPredicted RBP12.77□□□□□ -0.36
DDX55-206ENST00000539934 PBKQ96KB5 322 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 CFAP57Q96MR6 1250 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 ZNF184Q99676 751 aaPredicted RBP12.77□□□□□ -0.36
DDX55-206ENST00000539934 ATP13A2Q9NQ11 1180 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 DIABLOQ9NR28 239 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 NENFQ9UMX5 172 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 GTF2A1LQ9UNN4 478 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 STK38LQ9Y2H1 464 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 HYOU1Q9Y4L1 999 aa12.77□□□□□ -0.36
DDX55-206ENST00000539934 ATP8B3O60423 1300 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 LPXNO60711 386 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 TOM1L1O75674 476 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 UBOX5O94941 541 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 BMP10O95393 424 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 ACSL1P33121 698 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 HARS2P49590 506 aaKnown RBP12.77□□□□□ -0.37
DDX55-206ENST00000539934 AP2S1P53680 142 aaPredicted RBP12.77□□□□□ -0.37
DDX55-206ENST00000539934 FOXK2Q01167 660 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 TSPY1Q01534 308 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 LGALS3BPQ08380 585 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 CLUL1Q15846 466 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 SEZ6Q53EL9 994 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 RWDD4Q6NW29 188 aaKnown RBP12.77□□□□□ -0.37
DDX55-206ENST00000539934 OTOP3Q7RTS5 596 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 TMPRSS9Q7Z410 1059 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 ADGRG5Q8IZF4 528 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 OR6J1Q8NGC5 347 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 SLC30A5Q8TAD4 765 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 LRRC8CQ8TDW0 803 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 ZNF516Q92618 1163 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 FAM84AQ96KN4 292 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 KREMEN1Q96MU8 473 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 AGPAT1Q99943 283 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 MLPHQ9BV36 600 aaPredicted RBP12.77□□□□□ -0.37
DDX55-206ENST00000539934 TRIM55Q9BYV6 548 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 LHX5Q9H2C1 402 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 C1orf112Q9NSG2 853 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 NCKIPSDQ9NZQ3 722 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 TRPS1Q9UHF7 1281 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 PTBP2Q9UKA9 531 aaKnown RBP12.77□□□□□ -0.37
DDX55-206ENST00000539934 VWA7Q9Y334 891 aa12.77□□□□□ -0.37
DDX55-206ENST00000539934 UTP11Q9Y3A2 253 aaKnown RBP12.77□□□□□ -0.37
DDX55-206ENST00000539934 TRIP12Q14669 1992 aaPredicted RBP12.76□□□□□ -0.37
DDX55-206ENST00000539934 TRPC5OSA6NMA1 111 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 AREL1O15033 823 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 ZNF185O15231 689 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 TRMUO75648 421 aaKnown RBP12.76□□□□□ -0.37
DDX55-206ENST00000539934 GABBR2O75899 941 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 C22orf31O95567 290 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 ASS1P00966 412 aaKnown RBP12.76□□□□□ -0.37
DDX55-206ENST00000539934 CPB1P15086 417 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 TCP1P17987 556 aaKnown RBP12.76□□□□□ -0.37
DDX55-206ENST00000539934 EEF1A1P68104 462 aaKnown RBP12.76□□□□□ -0.37
DDX55-206ENST00000539934 CLDN10P78369 228 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 OCA2Q04671 838 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 EEF1A2Q05639 463 aaKnown RBP12.76□□□□□ -0.37
DDX55-206ENST00000539934 RNASELQ05823 741 aaKnown RBP12.76□□□□□ -0.37
DDX55-206ENST00000539934 PLD1Q13393 1074 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 C21orf62-AS1Q17RA5 79 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 ZACNQ401N2 412 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 DUSP28Q4G0W2 176 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 EEF1A1P5Q5VTE0 462 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 KLHDC10Q6PID8 442 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 C15orf39Q6ZRI6 1047 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 SLC20A1Q8WUM9 679 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 YME1L1Q96TA2 773 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 PSMB7Q99436 277 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 ACO2Q99798 780 aaKnown RBP12.76□□□□□ -0.37
DDX55-206ENST00000539934 SYT11Q9BT88 431 aa12.76□□□□□ -0.37
DDX55-206ENST00000539934 PI4K2AQ9BTU6 479 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms