RNA–Protein interactions for RNA: ENST00000539885.1

NCAPD2-209, Transcript of non-SMC condensin I complex subunit D2, human

TSL 3

Gene NCAPD2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD2-209	ENST00000539885	TM9SF3	Q9HD45	589 aa		11.44	□□□□□ -0.58
NCAPD2-209	ENST00000539885	LUC7L	Q9NQ29	371 aa	Known RBP	11.44	□□□□□ -0.58
NCAPD2-209	ENST00000539885	HECA	Q9UBI9	543 aa	Predicted RBP	11.44	□□□□□ -0.58
NCAPD2-209	ENST00000539885	UBA2	Q9UBT2	640 aa	Predicted RBP	11.44	□□□□□ -0.58
NCAPD2-209	ENST00000539885	MFHAS1	Q9Y4C4	1052 aa		11.44	□□□□□ -0.58
NCAPD2-209	ENST00000539885	SDK1	Q7Z5N4	2213 aa		11.44	□□□□□ -0.58
NCAPD2-209	ENST00000539885	NYNRIN	Q9P2P1	1898 aa	Known RBP	11.44	□□□□□ -0.58
NCAPD2-209	ENST00000539885	TBC1D3D	A0A087WVF3	549 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	TBC1D3I	A0A087WXS9	549 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	TBC1D3E	A0A087X179	549 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	TBC1D3K	A0A087X1G2	549 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	FAM47DP	A6NHR8	397 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	TBC1D3L	B9A6J9	549 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	AP1G1	O43747	822 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	KRT7	P08729	469 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	TBC1D3H	P0C7X1	549 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	TCF4	P15884	667 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	ARHGAP25	P42331	645 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	MAPK8	P45983	427 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	SUOX	P51687	545 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	RHOA	P61586	193 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	PDK2	Q15119	407 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	SMTNL2	Q2TAL5	461 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	MYLK3	Q32MK0	819 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	SETMAR	Q53H47	684 aa	Predicted RBP	11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	SLC45A4	Q5BKX6	768 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	ARSI	Q5FYB1	569 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	KCNT1	Q5JUK3	1230 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	TBC1D3G	Q6DHY5	549 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	TBC1D3C	Q6IPX1	549 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	NAPEPLD	Q6IQ20	393 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	TMCO3	Q6UWJ1	677 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	PRPF39	Q86UA1	669 aa	Known RBP	11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	LRRC49	Q8IUZ0	686 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	MAP7D3	Q8IWC1	876 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	ARHGAP12	Q8IWW6	846 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	CCDC170	Q8IYT3	715 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	TC2N	Q8N9U0	490 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	TSC1	Q92574	1164 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	HSPH1	Q92598	858 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	ARRDC3	Q96B67	414 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	ZNF599	Q96NL3	588 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	CSPG4P5	Q96PW8	444 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	PANX2	Q96RD6	677 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	CHP1	Q99653	195 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	GTPBP2	Q9BX10	602 aa	Known RBP	11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	PACSIN1	Q9BY11	444 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	ZDHHC6	Q9H6R6	413 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	PCDH18	Q9HCL0	1135 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	NUP205	Q92621	2012 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	PCDH15	Q96QU1	1955 aa		11.43	□□□□□ -0.58
NCAPD2-209	ENST00000539885	DCDC2B	A2VCK2	349 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	KRIT1	O00522	736 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	VILL	O15195	856 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	DFNA5	O60443	496 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	RNGTT	O60942	597 aa	Known RBP	11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	GJB3	O75712	270 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	ADRB3	P13945	408 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	SSR1	P43307	286 aa	Known RBP	11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	CSNK1D	P48730	415 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	PAPOLA	P51003	745 aa	Known RBP	11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	CDH6	P55285	790 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	TAS2R38	P59533	333 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	PPP2CB	P62714	309 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	PPP2CA	P67775	309 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	IL10RB	Q08334	325 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	OVGP1	Q12889	678 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	HNRNPD	Q14103	355 aa	Known RBP	11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	KRT81	Q14533	505 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	POM121L1P	Q3SYA9	428 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	ZNF805	Q5CZA5	627 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	KIAA1161	Q6NSJ0	714 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	FBXL19	Q6PCT2	694 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	ADAT2	Q7Z6V5	191 aa	Known RBP	11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	IQCH	Q86VS3	1027 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	VSIG1	Q86XK7	387 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	RYBP	Q8N488	228 aa	Predicted RBP	11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	NPW	Q8N729	165 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	HCAR2	Q8TDS4	363 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	CELF6	Q96J87	481 aa	Known RBP	11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	BTBD6	Q96KE9	485 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	TUBGCP5	Q96RT8	1024 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	ZNF670	Q9BS34	389 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	CPEB1	Q9BZB8	566 aa	Known RBP	11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	SLC39A8	Q9C0K1	460 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	SLC32A1	Q9H598	525 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	SP110	Q9HB58	689 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	SPTLC3	Q9NUV7	552 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	DKK3	Q9UBP4	350 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	LHX3	Q9UBR4	397 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	ZKSCAN5	Q9Y2L8	839 aa		11.42	□□□□□ -0.58
NCAPD2-209	ENST00000539885	CHD5	Q8TDI0	1954 aa		11.41	□□□□□ -0.58
NCAPD2-209	ENST00000539885		A0A1B0GVT2	93 aa		11.41	□□□□□ -0.58
NCAPD2-209	ENST00000539885	GOLGA6L6	A8MZA4	724 aa		11.41	□□□□□ -0.58
NCAPD2-209	ENST00000539885	ZNF487	B1APH4	448 aa		11.41	□□□□□ -0.58
NCAPD2-209	ENST00000539885	PRAMEF26	H0Y7S4	382 aa		11.41	□□□□□ -0.58
NCAPD2-209	ENST00000539885	DFFA	O00273	331 aa		11.41	□□□□□ -0.58
NCAPD2-209	ENST00000539885	PLK4	O00444	970 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms