RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 PSMB7Q99436 277 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 SYT11Q9BT88 431 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 TRIM4Q9C037 500 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 TNKS2Q9H2K2 1166 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 HAUS4Q9H6D7 363 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 ASCL3Q9NQ33 180 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.26■□□□□ 0.03
USB1-203ENST00000539737 ADAM22Q9P0K1 906 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 KLF15Q9UIH9 416 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 SATB2Q9UPW6 733 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 PAXBP1Q9Y5B6 917 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 OR51B4Q9Y5P0 310 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 ACTL7AQ9Y615 435 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 BOD1L1Q8NFC6 3051 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 KCNU1A8MYU2 1149 aa15.25■□□□□ 0.03
USB1-203ENST00000539737 PRAMEF26H0Y7S4 382 aa15.25■□□□□ 0.03
USB1-203ENST00000539737 GOLGA8SH3BPF8 625 aa15.25■□□□□ 0.03
USB1-203ENST00000539737 I6L893 689 aaPredicted RBP15.25■□□□□ 0.03
USB1-203ENST00000539737 SRCP12931 536 aa15.25■□□□□ 0.03
USB1-203ENST00000539737 TFE3P19532 575 aaPredicted RBP15.25■□□□□ 0.03
USB1-203ENST00000539737 SULT2A1Q06520 285 aa15.25■□□□□ 0.03
USB1-203ENST00000539737 TCEA2Q15560 299 aa15.25■□□□□ 0.03
USB1-203ENST00000539737 CDKN3Q16667 212 aa15.25■□□□□ 0.03
USB1-203ENST00000539737 GUSBP11Q6P575 273 aa15.25■□□□□ 0.03
USB1-203ENST00000539737 MON1BQ7L1V2 547 aa15.25■□□□□ 0.03
USB1-203ENST00000539737 ARCQ7LC44 396 aa15.25■□□□□ 0.03
USB1-203ENST00000539737 CPLX3Q8WVH0 158 aa15.25■□□□□ 0.03
USB1-203ENST00000539737 KCNE4Q8WWG9 221 aa15.25■□□□□ 0.03
USB1-203ENST00000539737 TTC9Q92623 222 aa15.25■□□□□ 0.03
USB1-203ENST00000539737 ATXN7L3BQ96GX2 97 aa15.25■□□□□ 0.03
USB1-203ENST00000539737 FEM1AQ9BSK4 669 aa15.25■□□□□ 0.03
USB1-203ENST00000539737 TRIM5Q9C035 493 aa15.25■□□□□ 0.03
USB1-203ENST00000539737 TCEAL2Q9H3H9 227 aaPredicted RBP15.25■□□□□ 0.03
USB1-203ENST00000539737 DNAJC28Q9NX36 388 aa15.25■□□□□ 0.03
USB1-203ENST00000539737 CPED1A4D0V7 1026 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 POM121BA6NF01 834 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 K7ESM1 405 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 ERVH48-1M5A8F1 160 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 ATP9BO43861 1147 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 SERPING1P05155 500 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 CDK4P11802 303 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 CKMT1AP12532 417 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 CASP14P31944 242 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 TMPRSS3P57727 454 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 RNASE9P60153 205 aaKnown RBP15.24■□□□□ 0.03
USB1-203ENST00000539737 NFKB2Q00653 900 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 NME3Q13232 169 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 MAPK8IP2Q13387 824 aaPredicted RBP15.24■□□□□ 0.03
USB1-203ENST00000539737 EIF4EBP2Q13542 120 aaPredicted RBP15.24■□□□□ 0.03
USB1-203ENST00000539737 AUHQ13825 339 aaKnown RBP15.24■□□□□ 0.03
USB1-203ENST00000539737 ALFQ53S48 1182 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 C2CD6Q53TS8 623 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 OTUD1Q5VV17 481 aaPredicted RBP15.24■□□□□ 0.03
USB1-203ENST00000539737 ACAD10Q6JQN1 1059 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 ZNF571Q7Z3V5 609 aaPredicted RBP15.24■□□□□ 0.03
USB1-203ENST00000539737 PTAR1Q7Z6K3 402 aaPredicted RBP15.24■□□□□ 0.03
USB1-203ENST00000539737 IQCHQ86VS3 1027 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 SH2D3CQ8N5H7 860 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 IFI44Q8TCB0 444 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 MAPK15Q8TD08 544 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 RBSNQ9H1K0 784 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 METTL5Q9NRN9 209 aaKnown RBP15.24■□□□□ 0.03
USB1-203ENST00000539737 KLHL11Q9NVR0 708 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 SLC25A13Q9UJS0 675 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 VPS28Q9UK41 221 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 DMTF1Q9Y222 760 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 HS3ST4Q9Y661 456 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 TRPM6Q9BX84 2022 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 SPTA1P02549 2419 aa15.24■□□□□ 0.03
USB1-203ENST00000539737 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.23■□□□□ 0.03
USB1-203ENST00000539737 TCAF2A6NFQ2 919 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 C1QTNF3-AMACRE9PGA6 284 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 MCF2LO15068 1137 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 SLC7A4O43246 635 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 PCDH8O95206 1070 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 F9P00740 461 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 GZMAP12544 262 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 SULT1E1P49888 294 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 PLK1P53350 603 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 E2F1Q01094 437 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 PTP4A2Q12974 167 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 ZNF177Q13360 481 aaPredicted RBP15.23■□□□□ 0.03
USB1-203ENST00000539737 DEFB133Q30KQ1 61 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 SLC25A52Q3SY17 297 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 PERM1Q5SV97 790 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 DNAJC24Q6P3W2 148 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 Q6ZSR6 202 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 NYAP1Q6ZVC0 841 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 EFL1Q7Z2Z2 1120 aaKnown RBP15.23■□□□□ 0.03
USB1-203ENST00000539737 HORMAD1Q86X24 394 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 RBFAQ8N0V3 343 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 C3orf20Q8ND61 904 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 OR2A12Q8NGT7 310 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 TRIM11Q96F44 468 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 PGAP3Q96FM1 320 aaPredicted RBP15.23■□□□□ 0.03
USB1-203ENST00000539737 BMFQ96LC9 184 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 NPY6RQ99463 290 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 SELENOOQ9BVL4 669 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 SIK2Q9H0K1 926 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 GGT7Q9UJ14 662 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms