RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 C10orf142B7Z368 130 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 C1QTNF3-AMACRE9PGA6 284 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 PIGNO95427 931 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 SEMA4FO95754 770 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 UGT2B4P06133 528 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 SERPINB6P35237 376 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 GARSP41250 739 aaKnown RBP15.98■□□□□ 0.15
RPAIN-206ENST00000539417 ADPRHP54922 357 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 LBRQ14739 615 aaKnown RBP15.98■□□□□ 0.15
RPAIN-206ENST00000539417 PIP5KL1Q5T9C9 394 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 DCAF12L1Q5VU92 463 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 KAZNQ674X7 775 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 TCEAL6Q6IPX3 200 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 NCEH1Q6PIU2 408 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 PARS2Q7L3T8 475 aaKnown RBP15.98■□□□□ 0.15
RPAIN-206ENST00000539417 DSG4Q86SJ6 1040 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 C11orf74Q86VG3 221 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 PLPP6Q8IY26 295 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 CASKIN2Q8WXE0 1202 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 PIGKQ92643 395 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 TCEAL3Q969E4 200 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 LOXL4Q96JB6 756 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 CCDC114Q96M63 670 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 HINFPQ9BQA5 517 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 EBF2Q9HAK2 575 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 LZTFL1Q9NQ48 299 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 GMEB2Q9UKD1 530 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 SCML1Q9UN30 329 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 FARP1Q9Y4F1 1045 aaPredicted RBP15.98■□□□□ 0.15
RPAIN-206ENST00000539417 HEY1Q9Y5J3 304 aa15.98■□□□□ 0.15
RPAIN-206ENST00000539417 EP300Q09472 2414 aaPredicted RBP15.98■□□□□ 0.15
RPAIN-206ENST00000539417 hCG_1818297A0A087WSY0 165 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 METTL12A8MUP2 240 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 APOL1O14791 398 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 DDX3YO15523 660 aaKnown RBP15.97■□□□□ 0.15
RPAIN-206ENST00000539417 PRNPP04156 253 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 IGHV4-34P06331 123 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 PECAM1P16284 738 aaPredicted RBP15.97■□□□□ 0.15
RPAIN-206ENST00000539417 ITIH2P19823 946 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 CTNNA2P26232 953 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 HOXD11P31277 338 aaPredicted RBP15.97■□□□□ 0.15
RPAIN-206ENST00000539417 MPLP40238 635 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 MAXP61244 160 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 SNRPD1P62314 119 aaKnown RBP15.97■□□□□ 0.15
RPAIN-206ENST00000539417 PPP2CBP62714 309 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 PPP2CAP67775 309 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 IHHQ14623 411 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 GSE1Q14687 1217 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 SF3A2Q15428 464 aaKnown RBP15.97■□□□□ 0.15
RPAIN-206ENST00000539417 PLA2G2CQ5R387 149 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 FAM46CQ5VWP2 391 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 LYSMD4Q5XG99 296 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 OR14C36Q8NHC7 312 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 GDAP1L1Q96MZ0 367 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 LGMNQ99538 433 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 HEMGNQ9BXL5 484 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 FSCN3Q9NQT6 498 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 RXFP3Q9NSD7 469 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 FZD4Q9ULV1 537 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 NCKAP1Q9Y2A7 1128 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 RIF1Q5UIP0 2472 aaKnown RBP15.97■□□□□ 0.15
RPAIN-206ENST00000539417 GON4LQ3T8J9 2241 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 SPINT1O43278 529 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 CST8O60676 142 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 ZRANB2O95218 330 aaKnown RBP eCLIP15.97■□□□□ 0.15
RPAIN-206ENST00000539417 POP4O95707 220 aaKnown RBP15.97■□□□□ 0.15
RPAIN-206ENST00000539417 IGSF6O95976 241 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 ABL2P42684 1182 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 LRRC73Q5JTD7 316 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 TMCO4Q5TGY1 634 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 CYP2U1Q7Z449 544 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 ZSWIM9Q86XI8 627 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 VSIG1Q86XK7 387 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 RCOR2Q8IZ40 523 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 EXD1Q8NHP7 514 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 BIRC7Q96CA5 298 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 KLHL32Q96NJ5 620 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 ORAI3Q9BRQ5 295 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 CINPQ9BW66 212 aaPredicted RBP15.97■□□□□ 0.15
RPAIN-206ENST00000539417 SGK2Q9HBY8 427 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 SEMA4GQ9NTN9 838 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 PILRBQ9UKJ0 227 aa15.97■□□□□ 0.15
RPAIN-206ENST00000539417 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.97■□□□□ 0.15
RPAIN-206ENST00000539417 RALGAPA1Q6GYQ0 2036 aa15.96■□□□□ 0.15
RPAIN-206ENST00000539417 PLRG1O43660 514 aaKnown RBP15.96■□□□□ 0.14
RPAIN-206ENST00000539417 FSBPO95073 299 aa15.96■□□□□ 0.14
RPAIN-206ENST00000539417 CCDC175P0C221 793 aa15.96■□□□□ 0.14
RPAIN-206ENST00000539417 PYGMP11217 842 aa15.96■□□□□ 0.14
RPAIN-206ENST00000539417 ZNF211Q13398 564 aaPredicted RBP15.96■□□□□ 0.14
RPAIN-206ENST00000539417 SPDYCQ5MJ68 293 aa15.96■□□□□ 0.14
RPAIN-206ENST00000539417 GDPD4Q6W3E5 623 aa15.96■□□□□ 0.14
RPAIN-206ENST00000539417 ERN2Q76MJ5 926 aaKnown RBP15.96■□□□□ 0.14
RPAIN-206ENST00000539417 PEX26Q7Z412 305 aa15.96■□□□□ 0.14
RPAIN-206ENST00000539417 SRLQ86TD4 932 aa15.96■□□□□ 0.14
RPAIN-206ENST00000539417 CAMK1DQ8IU85 385 aa15.96■□□□□ 0.14
RPAIN-206ENST00000539417 CCDC50Q8IVM0 306 aa15.96■□□□□ 0.14
RPAIN-206ENST00000539417 KIAA2013Q8IYS2 634 aa15.96■□□□□ 0.14
RPAIN-206ENST00000539417 TEX26Q8N6G2 289 aa15.96■□□□□ 0.14
RPAIN-206ENST00000539417 CADM4Q8NFZ8 388 aa15.96■□□□□ 0.14
RPAIN-206ENST00000539417 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms