RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 ZNF599Q96NL3 588 aa13.93□□□□□ -0.18
CD9-208ENST00000538834 OMDQ99983 421 aa13.93□□□□□ -0.18
CD9-208ENST00000538834 HECAQ9UBI9 543 aaPredicted RBP13.93□□□□□ -0.18
CD9-208ENST00000538834 SUSD2Q9UGT4 822 aa13.93□□□□□ -0.18
CD9-208ENST00000538834 EIF2B4Q9UI10 523 aaKnown RBP13.93□□□□□ -0.18
CD9-208ENST00000538834 FARP1Q9Y4F1 1045 aaPredicted RBP13.93□□□□□ -0.18
CD9-208ENST00000538834 LRP4O75096 1905 aa13.93□□□□□ -0.18
CD9-208ENST00000538834 ATXN2Q99700 1313 aaKnown RBP13.92□□□□□ -0.18
CD9-208ENST00000538834 A0A1W2PR77 199 aa13.92□□□□□ -0.18
CD9-208ENST00000538834 TSPAN11A1L157 253 aa13.92□□□□□ -0.18
CD9-208ENST00000538834 SOWAHDA6NJG2 315 aa13.92□□□□□ -0.18
CD9-208ENST00000538834 LRRC72A6NJI9 287 aa13.92□□□□□ -0.18
CD9-208ENST00000538834 AP1G1O43747 822 aa13.92□□□□□ -0.18
CD9-208ENST00000538834 CR2P20023 1033 aa13.92□□□□□ -0.18
CD9-208ENST00000538834 SDHBP21912 280 aa13.92□□□□□ -0.18
CD9-208ENST00000538834 KDELR1P24390 212 aa13.92□□□□□ -0.18
CD9-208ENST00000538834 CDH6P55285 790 aa13.92□□□□□ -0.18
CD9-208ENST00000538834 MESDQ14696 234 aa13.92□□□□□ -0.18
CD9-208ENST00000538834 RFTN1Q14699 578 aaPredicted RBP13.92□□□□□ -0.18
CD9-208ENST00000538834 ANKRD20A8PQ5CZ79 823 aa13.92□□□□□ -0.18
CD9-208ENST00000538834 STPG1Q5TH74 334 aa13.92□□□□□ -0.18
CD9-208ENST00000538834 NCBP2-AS2Q69YL0 99 aa13.92□□□□□ -0.18
CD9-208ENST00000538834 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.92□□□□□ -0.18
CD9-208ENST00000538834 LEKR1Q6ZMV7 388 aa13.92□□□□□ -0.18
CD9-208ENST00000538834 ERN2Q76MJ5 926 aaKnown RBP13.92□□□□□ -0.18
CD9-208ENST00000538834 LRRC49Q8IUZ0 686 aa13.92□□□□□ -0.18
CD9-208ENST00000538834 HCAR2Q8TDS4 363 aa13.92□□□□□ -0.18
CD9-208ENST00000538834 RAPGEF5Q92565 580 aa13.92□□□□□ -0.18
CD9-208ENST00000538834 PSKH2Q96QS6 385 aa13.92□□□□□ -0.18
CD9-208ENST00000538834 RTKNQ9BST9 563 aa13.92□□□□□ -0.18
CD9-208ENST00000538834 PREBQ9HCU5 417 aa13.92□□□□□ -0.18
CD9-208ENST00000538834 DKK3Q9UBP4 350 aa13.92□□□□□ -0.18
CD9-208ENST00000538834 IPO11Q9UI26 975 aaKnown RBP13.92□□□□□ -0.18
CD9-208ENST00000538834 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.91□□□□□ -0.18
CD9-208ENST00000538834 UPK3BL1B0FP48 263 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 UPK3BL2E5RIL1 263 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 ARHGAP33O14559 1287 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 AREL1O15033 823 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 MUSKO15146 869 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 BCAT2O15382 392 aaPredicted RBP13.91□□□□□ -0.18
CD9-208ENST00000538834 BUB1BO60566 1050 aaPredicted RBP13.91□□□□□ -0.18
CD9-208ENST00000538834 ENGP17813 658 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 GKP32189 559 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 CYLC1P35663 651 aaPredicted RBP13.91□□□□□ -0.18
CD9-208ENST00000538834 NUDT1P36639 197 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 RGRP47804 291 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 ID4P47928 161 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 GRIA4P48058 902 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 PPP2CBP62714 309 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 PPP2CAP67775 309 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 SLC10A2Q12908 348 aaPredicted RBP13.91□□□□□ -0.18
CD9-208ENST00000538834 PUM1Q14671 1186 aaKnown RBP eCLIP13.91□□□□□ -0.18
CD9-208ENST00000538834 TMEM259Q4ZIN3 620 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 ZNF805Q5CZA5 627 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 ATXN7L2Q5T6C5 722 aaPredicted RBP13.91□□□□□ -0.18
CD9-208ENST00000538834 TMCO3Q6UWJ1 677 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 DBX2Q6ZNG2 339 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 PARS2Q7L3T8 475 aaKnown RBP13.91□□□□□ -0.18
CD9-208ENST00000538834 TEX26Q8N6G2 289 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 C12orf50Q8NA57 414 aaPredicted RBP13.91□□□□□ -0.18
CD9-208ENST00000538834 NETO2Q8NC67 525 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 OR14C36Q8NHC7 312 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 ECHDC3Q96DC8 303 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 GDAP1L1Q96MZ0 367 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 TSGA13Q96PP4 275 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 RNF157Q96PX1 679 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 EDEM2Q9BV94 578 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 OSBPL1AQ9BXW6 950 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 TM6SF2Q9BZW4 377 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 TM9SF3Q9HD45 589 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 DNAAF2Q9NVR5 837 aaKnown RBP13.91□□□□□ -0.18
CD9-208ENST00000538834 UBA2Q9UBT2 640 aaPredicted RBP13.91□□□□□ -0.18
CD9-208ENST00000538834 TFR2Q9UP52 801 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 ZFR2Q9UPR6 939 aaKnown RBP13.91□□□□□ -0.18
CD9-208ENST00000538834 FADS3Q9Y5Q0 445 aa13.91□□□□□ -0.18
CD9-208ENST00000538834 COL5A1P20908 1838 aaPredicted RBP13.91□□□□□ -0.18
CD9-208ENST00000538834 MEI4A8MW99 385 aa13.9□□□□□ -0.18
CD9-208ENST00000538834 KPNA3O00505 521 aaPredicted RBP13.9□□□□□ -0.18
CD9-208ENST00000538834 WNT9AO14904 365 aa13.9□□□□□ -0.18
CD9-208ENST00000538834 INSIG1O15503 277 aa13.9□□□□□ -0.18
CD9-208ENST00000538834 DAPK3O43293 454 aa13.9□□□□□ -0.18
CD9-208ENST00000538834 ADRB3P13945 408 aa13.9□□□□□ -0.18
CD9-208ENST00000538834 RECQLP46063 649 aaPredicted RBP13.9□□□□□ -0.18
CD9-208ENST00000538834 RACK1P63244 317 aaKnown RBP13.9□□□□□ -0.18
CD9-208ENST00000538834 SLC10A7Q0GE19 358 aa13.9□□□□□ -0.18
CD9-208ENST00000538834 GALNT2Q10471 571 aa13.9□□□□□ -0.18
CD9-208ENST00000538834 TMCO4Q5TGY1 634 aa13.9□□□□□ -0.18
CD9-208ENST00000538834 SLC9A4Q6AI14 798 aa13.9□□□□□ -0.18
CD9-208ENST00000538834 ALG1LQ6GMV1 187 aa13.9□□□□□ -0.18
CD9-208ENST00000538834 PLD5Q8N7P1 536 aa13.9□□□□□ -0.18
CD9-208ENST00000538834 TSEN2Q8NCE0 465 aaKnown RBP13.9□□□□□ -0.18
CD9-208ENST00000538834 MAML1Q92585 1016 aa13.9□□□□□ -0.18
CD9-208ENST00000538834 RAB7BQ96AH8 199 aa13.9□□□□□ -0.18
CD9-208ENST00000538834 CALR3Q96L12 384 aaKnown RBP13.9□□□□□ -0.18
CD9-208ENST00000538834 NUSAP1Q9BXS6 441 aaKnown RBP13.9□□□□□ -0.18
CD9-208ENST00000538834 ZDHHC5Q9C0B5 715 aa13.9□□□□□ -0.18
CD9-208ENST00000538834 LACRTQ9GZZ8 138 aa13.9□□□□□ -0.18
CD9-208ENST00000538834 ALG6Q9Y672 507 aa13.9□□□□□ -0.18
CD9-208ENST00000538834 GOLGA4Q13439 2230 aaKnown RBP13.9□□□□□ -0.18
CD9-208ENST00000538834 PTPRBP23467 1997 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms