RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 ATG16L1Q676U5 607 aa15□□□□□ -0.01
ATL3-203ENST00000538786 KIAA0930Q6ICG6 404 aaPredicted RBP15□□□□□ -0.01
ATL3-203ENST00000538786 ESRP1Q6NXG1 681 aaKnown RBP15□□□□□ -0.01
ATL3-203ENST00000538786 TMEM150AQ86TG1 271 aa15□□□□□ -0.01
ATL3-203ENST00000538786 NUDCD3Q8IVD9 361 aa15□□□□□ -0.01
ATL3-203ENST00000538786 SLC25A41Q8N5S1 370 aa15□□□□□ -0.01
ATL3-203ENST00000538786 FITM2Q8N6M3 262 aa15□□□□□ -0.01
ATL3-203ENST00000538786 E2F7Q96AV8 911 aa15□□□□□ -0.01
ATL3-203ENST00000538786 ATXN7L3BQ96GX2 97 aa15□□□□□ -0.01
ATL3-203ENST00000538786 VPS39Q96JC1 886 aa15□□□□□ -0.01
ATL3-203ENST00000538786 DDX50Q9BQ39 737 aaKnown RBP15□□□□□ -0.01
ATL3-203ENST00000538786 MECRQ9BV79 373 aa15□□□□□ -0.01
ATL3-203ENST00000538786 IL23AQ9NPF7 189 aa15□□□□□ -0.01
ATL3-203ENST00000538786 GGT7Q9UJ14 662 aa15□□□□□ -0.01
ATL3-203ENST00000538786 EMCNQ9ULC0 261 aa15□□□□□ -0.01
ATL3-203ENST00000538786 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.99□□□□□ -0.01
ATL3-203ENST00000538786 GOLGA8TH3BQL2 631 aa14.99□□□□□ -0.01
ATL3-203ENST00000538786 PLIN3O60664 434 aa14.99□□□□□ -0.01
ATL3-203ENST00000538786 SIN3BO75182 1162 aa14.99□□□□□ -0.01
ATL3-203ENST00000538786 FGF18O76093 207 aa14.99□□□□□ -0.01
ATL3-203ENST00000538786 ARNTP27540 789 aa14.99□□□□□ -0.01
ATL3-203ENST00000538786 ZNF177Q13360 481 aaPredicted RBP14.99□□□□□ -0.01
ATL3-203ENST00000538786 SEPT6Q14141 434 aa14.99□□□□□ -0.01
ATL3-203ENST00000538786 UGP2Q16851 508 aa14.99□□□□□ -0.01
ATL3-203ENST00000538786 PPM1JQ5JR12 505 aa14.99□□□□□ -0.01
ATL3-203ENST00000538786 IL31Q6EBC2 164 aa14.99□□□□□ -0.01
ATL3-203ENST00000538786 OTOP2Q7RTS6 562 aa14.99□□□□□ -0.01
ATL3-203ENST00000538786 CMC1Q7Z7K0 106 aa14.99□□□□□ -0.01
ATL3-203ENST00000538786 SETD3Q86TU7 594 aaPredicted RBP14.99□□□□□ -0.01
ATL3-203ENST00000538786 HERC6Q8IVU3 1022 aa14.99□□□□□ -0.01
ATL3-203ENST00000538786 TRIM55Q9BYV6 548 aa14.99□□□□□ -0.01
ATL3-203ENST00000538786 ZBP1Q9H171 429 aa14.99□□□□□ -0.01
ATL3-203ENST00000538786 RHOJQ9H4E5 214 aa14.99□□□□□ -0.01
ATL3-203ENST00000538786 NPHS2Q9NP85 383 aa14.99□□□□□ -0.01
ATL3-203ENST00000538786 STOML2Q9UJZ1 356 aa14.99□□□□□ -0.01
ATL3-203ENST00000538786 SSX2IPQ9Y2D8 614 aa14.99□□□□□ -0.01
ATL3-203ENST00000538786 A0A1B0GVM2 712 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 LOC285095A0A1B0GVY8 99 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 ILVBLA1L0T0 632 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 TCAF2A6NFQ2 919 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 UBOX5O94941 541 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 LATS1O95835 1130 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 F11P03951 625 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 IRF1P10914 325 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 MBL2P11226 248 aaPredicted RBP14.98□□□□□ -0.01
ATL3-203ENST00000538786 TMPRSS15P98073 1019 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 OVGP1Q12889 678 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 MSLNQ13421 630 aaPredicted RBP14.98□□□□□ -0.01
ATL3-203ENST00000538786 CHI3L2Q15782 390 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 CNGA3Q16281 694 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 PABPC1LQ4VXU2 614 aaKnown RBP14.98□□□□□ -0.01
ATL3-203ENST00000538786 ALG1LQ6GMV1 187 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 C16orf46Q6P387 395 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 ZC3HC1Q86WB0 502 aaKnown RBP14.98□□□□□ -0.01
ATL3-203ENST00000538786 MICALL1Q8N3F8 863 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 BBS5Q8N3I7 341 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 OR7D4Q8NG98 312 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 OR52K2Q8NGK3 314 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 ZFRQ96KR1 1074 aaKnown RBP14.98□□□□□ -0.01
ATL3-203ENST00000538786 C7orf26Q96N11 449 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 GPR22Q99680 433 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 SEMA3CQ99985 751 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 SLC2A6Q9UGQ3 507 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 TBC1D30Q9Y2I9 924 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 CAPN7Q9Y6W3 813 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 TTC24A2A3L6 582 aaPredicted RBP14.98□□□□□ -0.01
ATL3-203ENST00000538786 MUSKO15146 869 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 KDELR3O43731 214 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 DCTN3O75935 186 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 PAPSS2O95340 614 aaPredicted RBP14.98□□□□□ -0.01
ATL3-203ENST00000538786 GSRP00390 522 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 PROCP04070 461 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 CTSAP10619 480 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 SGSHP51688 502 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 OXCT1P55809 520 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 BST1Q10588 318 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 SETDB1Q15047 1291 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 SIRPB2Q5JXA9 342 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 WBP2Q969T9 261 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 FAM167BQ9BTA0 163 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 SPON2Q9BUD6 331 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 ZNF334Q9HCZ1 680 aaPredicted RBP14.98□□□□□ -0.01
ATL3-203ENST00000538786 SMPD4Q9NXE4 827 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 SEPT3Q9UH03 358 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 ASB3Q9Y575 518 aa14.98□□□□□ -0.01
ATL3-203ENST00000538786 A0A096LPK6 155 aa14.97□□□□□ -0.01
ATL3-203ENST00000538786 EPOP01588 193 aa14.97□□□□□ -0.01
ATL3-203ENST00000538786 AHSGP02765 367 aa14.97□□□□□ -0.01
ATL3-203ENST00000538786 PRKCGP05129 697 aa14.97□□□□□ -0.01
ATL3-203ENST00000538786 RHOCP08134 193 aa14.97□□□□□ -0.01
ATL3-203ENST00000538786 F7P08709 466 aaPredicted RBP14.97□□□□□ -0.01
ATL3-203ENST00000538786 CNPP09543 421 aaKnown RBP14.97□□□□□ -0.01
ATL3-203ENST00000538786 ATXN1LP0C7T5 689 aaKnown RBP14.97□□□□□ -0.01
ATL3-203ENST00000538786 ABCG1P45844 678 aa14.97□□□□□ -0.01
ATL3-203ENST00000538786 POLD2P49005 469 aa14.97□□□□□ -0.01
ATL3-203ENST00000538786 CSRP3P50461 194 aa14.97□□□□□ -0.01
ATL3-203ENST00000538786 HTRA4P83105 476 aaPredicted RBP14.97□□□□□ -0.01
ATL3-203ENST00000538786 SMAD3P84022 425 aaKnown RBP14.97□□□□□ -0.01
ATL3-203ENST00000538786 BNIP1Q12981 228 aa14.97□□□□□ -0.01
ATL3-203ENST00000538786 THOC5Q13769 683 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms