RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 PPP1R14AQ96A00 147 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 TMEM138Q9NPI0 162 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 FADS3Q9Y5Q0 445 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 E9PCH4 1651 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 CHP2O43745 196 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 RNASEH1O60930 286 aaKnown RBP6.99□□□□□ -1.29
SORT1-209ENST00000538502 CABYRO75952 493 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 GJB6O95452 261 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 GTF2E2P29084 291 aaKnown RBP6.99□□□□□ -1.29
SORT1-209ENST00000538502 RAB10P61026 200 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 ATP6V0D1P61421 351 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 SLC6A3Q01959 620 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 SKIV2LQ15477 1246 aaKnown RBP6.99□□□□□ -1.29
SORT1-209ENST00000538502 RNF220Q5VTB9 566 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 ZNF470Q6ECI4 717 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 XKRXQ6PP77 449 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 CAMKK1Q8N5S9 505 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 FBXO30Q8TB52 745 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 TAS1R2Q8TE23 839 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 ATL1Q8WXF7 558 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 ACOT12Q8WYK0 555 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 ROPN1LQ96C74 230 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 YME1L1Q96TA2 773 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 MED28Q9H204 178 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 RIOX1Q9H6W3 641 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 PIDD1Q9HB75 910 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 ZNF232Q9UNY5 417 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 A0A088AWK7 358 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 ORC5O43913 435 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 SIN3BO75182 1162 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 BPGMP07738 259 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 ZNF10P21506 573 aaPredicted RBP6.98□□□□□ -1.29
SORT1-209ENST00000538502 MAPK10P53779 464 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 IL2P60568 153 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 SPP2Q13103 211 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 DDX39BQ13838 428 aaKnown RBP6.98□□□□□ -1.29
SORT1-209ENST00000538502 HERC3Q15034 1050 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 MFSD4BQ5TF39 518 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 GLB1LQ6UWU2 654 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 ZCCHC23Q6ZST2 131 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 ZNF467Q7Z7K2 595 aaPredicted RBP6.98□□□□□ -1.29
SORT1-209ENST00000538502 UNC5BQ8IZJ1 945 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 SYNE4Q8N205 404 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 MEIOBQ8N635 442 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 ZNF606Q8WXB4 792 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 CBWD1Q9BRT8 395 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 CRISPLD1Q9H336 500 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 SENP2Q9HC62 589 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 SMPD3Q9NY59 655 aaPredicted RBP6.98□□□□□ -1.29
SORT1-209ENST00000538502 UPB1Q9UBR1 384 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 VPS51Q9UID3 782 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 MAN2B2Q9Y2E5 1009 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 OR14I1A6ND48 311 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 PDE2AO00408 941 aaPredicted RBP6.98□□□□□ -1.29
SORT1-209ENST00000538502 PGRMC2O15173 223 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 HMBSP08397 361 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 CPT1AP50416 773 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 PITPNAQ00169 270 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 MTM1Q13496 603 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 MAPKAPK3Q16644 382 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 RBM48Q5RL73 367 aaKnown RBP6.98□□□□□ -1.29
SORT1-209ENST00000538502 TMEM110Q86TL2 294 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 IPCEF1Q8WWN9 437 aaPredicted RBP6.98□□□□□ -1.29
SORT1-209ENST00000538502 BHMTQ93088 406 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 S100A13Q99584 98 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 APBA2Q99767 749 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 COLEC11Q9BWP8 271 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 NT5MQ9NPB1 228 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 CD320Q9NPF0 282 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 CHST7Q9NS84 486 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 RBM22Q9NW64 420 aaKnown RBP eCLIP6.98□□□□□ -1.29
SORT1-209ENST00000538502 EMC3Q9P0I2 261 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 ZNF112Q9UJU3 913 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 GNEQ9Y223 722 aaKnown RBP6.98□□□□□ -1.29
SORT1-209ENST00000538502 SNX8Q9Y5X2 465 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 PAX3P23760 479 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 NTSP30990 170 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 AIF1P55008 147 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 C16orf46Q6P387 395 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 ZNF621Q6ZSS3 439 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 SV2AQ7L0J3 742 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 PM20D2Q8IYS1 436 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 PACRGLQ8N7B6 248 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 FAM47BQ8NA70 645 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 DQX1Q8TE96 717 aaKnown RBP6.98□□□□□ -1.29
SORT1-209ENST00000538502 SLC35C1Q96A29 364 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 SEPT5Q99719 369 aaPredicted RBP6.98□□□□□ -1.29
SORT1-209ENST00000538502 YIPF2Q9BWQ6 316 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 SEMA3DO95025 777 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 RHOCP08134 193 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 PRG2P13727 222 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 ETS2P15036 469 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 ERCC2P18074 760 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 SLC12A3P55017 1021 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 CDH4P55283 916 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 GSCP56915 257 aaPredicted RBP6.98□□□□□ -1.29
SORT1-209ENST00000538502 QPCTQ16769 361 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 ZPBP2Q6X784 338 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 ILDR2Q71H61 639 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 C11orf96Q7Z7L8 435 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms