RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 TERB1Q8NA31 727 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 PCDH19Q8TAB3 1148 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 C2orf15Q8WU43 125 aaKnown RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 HTR3CQ8WXA8 447 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 NXPE3Q969Y0 559 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 P2RY11Q96G91 374 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 NAF1Q96HR8 494 aaKnown RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 RNF157Q96PX1 679 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 TRIM56Q9BRZ2 755 aaKnown RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 ABCB6Q9NP58 842 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 C20orf96Q9NUD7 363 aaPredicted RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 GDE1Q9NZC3 331 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 FNIP2Q9P278 1114 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 MAP10Q9P2G4 905 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 FEZ2Q9UHY8 353 aaPredicted RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 LCMT1Q9UIC8 334 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 SPG11Q96JI7 2443 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 PI15O43692 258 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 NDUFS3O75489 264 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 LEFTY1O75610 366 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 VAPBO95292 243 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 HNF4AP41235 474 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 USP39Q53GS9 565 aaKnown RBP7.34□□□□□ -1.23
MSH6-209ENST00000538136 PPP4R1Q8TF05 950 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 RSPRY1Q96DX4 576 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 PPP1R36Q96LQ0 422 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 LRRC1Q9BTT6 524 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 TRAIPQ9BWF2 469 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 CAPN10Q9HC96 672 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 CFAP69A5D8W1 941 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 KIF2AO00139 706 aaPredicted RBP7.34□□□□□ -1.23
MSH6-209ENST00000538136 CRCPO75575 148 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 SLC25A14O95258 325 aaPredicted RBP7.34□□□□□ -1.23
MSH6-209ENST00000538136 MAGEA11P43364 429 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 DDX39BQ13838 428 aaKnown RBP7.34□□□□□ -1.23
MSH6-209ENST00000538136 ZNF234Q14588 700 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 GLT6D1Q7Z4J2 308 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 ZDHHC17Q8IUH5 632 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.34□□□□□ -1.23
MSH6-209ENST00000538136 CHMP6Q96FZ7 201 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 ASB2Q96Q27 587 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 SHCBP1LQ9BZQ2 653 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 LZTS1Q9Y250 596 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 TLR6Q9Y2C9 796 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 TMEM98Q9Y2Y6 226 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 PRRC2CQ9Y520 2896 aaKnown RBP7.34□□□□□ -1.23
MSH6-209ENST00000538136 PRRT4C9JH25 899 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 GPR39O43194 453 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 MYF5P13349 255 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 MPSTP25325 297 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 SLC1A1P43005 524 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 MLF2Q15773 248 aaPredicted RBP7.34□□□□□ -1.23
MSH6-209ENST00000538136 KRT71Q3SY84 523 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 SYTL3Q4VX76 610 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 ITPRIPL1Q6GPH6 555 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 PPP1R2P3Q6NXS1 205 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 ENPP7Q6UWV6 458 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 USP53Q70EK8 1073 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 MFSD6LQ8IWD5 586 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 SPATA6LQ8N4H0 392 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 NOA1Q8NC60 698 aaKnown RBP7.34□□□□□ -1.23
MSH6-209ENST00000538136 SMRP1Q8NCR6 262 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 POLR1EQ9GZS1 481 aaKnown RBP7.34□□□□□ -1.23
MSH6-209ENST00000538136 RRAGDQ9NQL2 400 aaPredicted RBP7.34□□□□□ -1.23
MSH6-209ENST00000538136 ACSS2Q9NR19 701 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 IMP3Q9NV31 184 aaKnown RBP7.34□□□□□ -1.23
MSH6-209ENST00000538136 CLIC5Q9NZA1 410 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 PCNX1Q96RV3 2341 aa7.34□□□□□ -1.23
MSH6-209ENST00000538136 OR51F1A6NGY5 319 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 INSIG1O15503 277 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 ERLIN1O75477 346 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 ALADP13716 330 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 GRIA1P42261 906 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 IL12RB1P42701 662 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 JAM2P57087 298 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 FNBP1LQ5T0N5 605 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 TTC19Q6DKK2 380 aaPredicted RBP7.33□□□□□ -1.24
MSH6-209ENST00000538136 PKN3Q6P5Z2 889 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 Q6ZVL8 140 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 TAF8Q7Z7C8 310 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 CCDC13Q8IYE1 715 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 PRSS58Q8IYP2 241 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 CEP112Q8N8E3 955 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 Q8N9G6 341 aaPredicted RBP7.33□□□□□ -1.24
MSH6-209ENST00000538136 FAM46DQ8NEK8 389 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 DDX1Q92499 740 aaKnown RBP7.33□□□□□ -1.24
MSH6-209ENST00000538136 MLPHQ9BV36 600 aaPredicted RBP7.33□□□□□ -1.24
MSH6-209ENST00000538136 CDC23Q9UJX2 597 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 HBS1LQ9Y450 684 aaKnown RBP7.33□□□□□ -1.24
MSH6-209ENST00000538136 OR1A2Q9Y585 309 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 RAI2Q9Y5P3 530 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 TMEM189-UBE2V1I3L0A0 370 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 SH3BP5O60239 455 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 GUCA1CO95843 209 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 CYP1A1P04798 512 aaPredicted RBP7.33□□□□□ -1.24
MSH6-209ENST00000538136 GSTA1P08263 222 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 GSTA2P09210 222 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 ZFXP17010 805 aaPredicted RBP7.33□□□□□ -1.24
MSH6-209ENST00000538136 GLRBP48167 497 aa7.33□□□□□ -1.24
MSH6-209ENST00000538136 PGGT1BP53609 377 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms