RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 RSAD2Q8WXG1 361 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 TTC9Q92623 222 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 TANKQ92844 425 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 FAM193BQ96PV7 902 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 TMEM246Q9BRR3 403 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 PORCNQ9H237 461 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 ZNF395Q9H8N7 513 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 WDR41Q9HAD4 459 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 TBC1D22BQ9NU19 505 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 ATP6V1HQ9UI12 483 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 DRG1Q9Y295 367 aaKnown RBP11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 PCP4L1A6NKN8 68 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 PIAS1O75925 651 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 P4HBP07237 508 aaKnown RBP11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 TMEM191BP0C7N4 346 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 L1CAMP32004 1257 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 CASP3P42574 277 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 ST13P50502 369 aaKnown RBP11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 TRIM72Q6ZMU5 477 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 CDR2LQ86X02 465 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 C12orf56Q8IXR9 622 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 NDUFAF2Q8N183 169 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 POC5Q8NA72 575 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 OLIG1Q8TAK6 271 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 ZSCAN18Q8TBC5 510 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 DACT3Q96B18 629 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 SDCCAG3Q96C92 435 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 ADI1Q9BV57 179 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 EMILIN2Q9BXX0 1053 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 EFCAB1Q9HAE3 211 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 CDY2AQ9Y6F7 541 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 CDY1Q9Y6F8 540 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 RGSL1A5PLK6 1076 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 C16orf96A6NNT2 1141 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 PDZK1P1A8MUH7 402 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 SERPINE1P05121 402 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 TCN1P20061 433 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 RBL1P28749 1068 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 SERPINB5P36952 375 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 RAD51Q06609 339 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 NAB1Q13506 487 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 STK11Q15831 433 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 SNAP47Q5SQN1 464 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 ZNF544Q6NX49 715 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 TLK2Q86UE8 772 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 ARHGEF19Q8IW93 802 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 GALNT12Q8IXK2 581 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 BPIFB6Q8NFQ5 453 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 BEST2Q8NFU1 509 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 RP9Q8TA86 221 aaKnown RBP11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 SEZ6LQ9BYH1 1024 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 CD320Q9NPF0 282 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 ENPP5Q9UJA9 477 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 DNPEPQ9ULA0 475 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 RWDD3Q9Y3V2 267 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 DGKBQ9Y6T7 804 aa11.01□□□□□ -0.65
CLSTN3-207ENST00000537408 TNRC6CQ9HCJ0 1690 aaKnown RBP11□□□□□ -0.65
CLSTN3-207ENST00000537408 UGT2B4P06133 528 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 LEPRP48357 1165 aaKnown RBP11□□□□□ -0.65
CLSTN3-207ENST00000537408 DEFA1P59665 94 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 DEFA3P59666 94 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 COL19A1Q14993 1142 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 DPH6Q7L8W6 267 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 ADAMTSL2Q86TH1 951 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 SFRP1Q8N474 314 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 TFAP2CQ92754 450 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 FBXL18Q96ME1 805 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 RBPJLQ9UBG7 517 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 AKT3Q9Y243 479 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 MAU2Q9Y6X3 613 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 H0YC42 278 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 KRT1P04264 644 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 CAPNS1P04632 268 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 TRIM49P0CI25 452 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 TRIM49CP0CI26 452 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 GAP43P17677 238 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 CD58P19256 250 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 BLVRAP53004 296 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 TPD52P55327 224 aaPredicted RBP11□□□□□ -0.65
CLSTN3-207ENST00000537408 TMEM132BQ14DG7 1078 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 CDK10Q15131 360 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 MTERF2Q49AM1 385 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 MTX3Q5HYI7 312 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 ERAP2Q6P179 960 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 CRTC3Q6UUV7 619 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 KATNAL2Q8IYT4 538 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 RCOR2Q8IZ40 523 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 RNF148Q8N7C7 305 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 GLMNQ92990 594 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 ATP6V1E2Q96A05 226 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 GPR88Q9GZN0 384 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 FAM49AQ9H0Q0 323 aaPredicted RBP11□□□□□ -0.65
CLSTN3-207ENST00000537408 SLC27A5Q9Y2P5 690 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 SAGE2PA6NJ88 616 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 PDPK1O15530 556 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 SGPL1O95470 568 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 NAGAP17050 411 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 ATF4P18848 351 aaPredicted RBP11□□□□□ -0.65
CLSTN3-207ENST00000537408 LIG4P49917 911 aa11□□□□□ -0.65
CLSTN3-207ENST00000537408 MFAP3P55082 362 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms