RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 EDEM1Q92611 657 aa9.68□□□□□ -0.86
CPSF7-217ENST00000537162 EDEM3Q9BZQ6 932 aa9.68□□□□□ -0.86
CPSF7-217ENST00000537162 PNPLA8Q9NP80 782 aa9.68□□□□□ -0.86
CPSF7-217ENST00000537162 NEU2Q9Y3R4 380 aa9.68□□□□□ -0.86
CPSF7-217ENST00000537162 HBS1LQ9Y450 684 aaKnown RBP9.68□□□□□ -0.86
CPSF7-217ENST00000537162 TMEM184BQ9Y519 407 aaPredicted RBP9.68□□□□□ -0.86
CPSF7-217ENST00000537162 PCDHB3Q9Y5E6 796 aa9.68□□□□□ -0.86
CPSF7-217ENST00000537162 CSPG4Q6UVK1 2322 aa9.68□□□□□ -0.86
CPSF7-217ENST00000537162 POLEQ07864 2286 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 IGLON5A6NGN9 336 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 B4E171 279 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 ACSL4O60488 711 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 TBCAO75347 108 aaKnown RBP9.67□□□□□ -0.86
CPSF7-217ENST00000537162 KATNA1O75449 491 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 STAU1O95793 577 aaKnown RBP9.67□□□□□ -0.86
CPSF7-217ENST00000537162 F9P00740 461 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 KRT18P05783 430 aaKnown RBP9.67□□□□□ -0.86
CPSF7-217ENST00000537162 DLATP10515 647 aaKnown RBP9.67□□□□□ -0.86
CPSF7-217ENST00000537162 PNLIPP16233 465 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 KLK2P20151 261 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 CAPN3P20807 821 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 FECHP22830 423 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 NFKBIAP25963 317 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 VARSP26640 1264 aaKnown RBP9.67□□□□□ -0.86
CPSF7-217ENST00000537162 CD1CP29017 333 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 CSF2RBP32927 897 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 ABCD1P33897 745 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 IGFALSP35858 605 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 TSPAN7P41732 249 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 HK3P52790 923 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 THOP1P52888 689 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 RPS21P63220 83 aaKnown RBP9.67□□□□□ -0.86
CPSF7-217ENST00000537162 ART3Q13508 389 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 AAMPQ13685 434 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 ARHGEF7Q14155 803 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 HLTFQ14527 1009 aaKnown RBP eCLIP9.67□□□□□ -0.86
CPSF7-217ENST00000537162 ELOCQ15369 112 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 DLG2Q15700 870 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 ALG11Q2TAA5 492 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 EDRF1Q3B7T1 1238 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 NKAIN2Q5VXU1 208 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 OGFOD3Q6PK18 319 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 ERN2Q76MJ5 926 aaKnown RBP9.67□□□□□ -0.86
CPSF7-217ENST00000537162 RD3Q7Z3Z2 195 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 TGIF2LYQ8IUE0 185 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 CHST14Q8NCH0 376 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 PNPLA2Q96AD5 504 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 HVCN1Q96D96 273 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 CYFIP2Q96F07 1278 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 LENG8Q96PV6 779 aaPredicted RBP9.67□□□□□ -0.86
CPSF7-217ENST00000537162 ACCSQ96QU6 501 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 C1QTNF2Q9BXJ5 285 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 TWSG1Q9GZX9 223 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 NUCKS1Q9H1E3 243 aaKnown RBP9.67□□□□□ -0.86
CPSF7-217ENST00000537162 PCDHGA9Q9Y5G4 932 aaKnown RBP9.67□□□□□ -0.86
CPSF7-217ENST00000537162 CYP46A1Q9Y6A2 500 aa9.67□□□□□ -0.86
CPSF7-217ENST00000537162 NSD1Q96L73 2696 aaPredicted RBP9.67□□□□□ -0.86
CPSF7-217ENST00000537162 ALOX15BO15296 676 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 GRID2O43424 1007 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 ATP9BO43861 1147 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 MOCS3O95396 460 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 IGLV3-27P01718 113 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 ALPIP09923 528 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 CTSEP14091 401 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 PDGFRAP16234 1089 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 HTR1EP28566 365 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 ALDH4A1P30038 563 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 CSTF2P33240 577 aaKnown RBP eCLIP9.66□□□□□ -0.86
CPSF7-217ENST00000537162 EIF4A3P38919 411 aaKnown RBP9.66□□□□□ -0.86
CPSF7-217ENST00000537162 NNMTP40261 264 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 TRIM29Q14134 588 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 DTHD1Q6ZMT9 781 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 MACC1Q6ZN28 852 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 FJX1Q86VR8 437 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 SKAP1Q86WV1 359 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 CCDC117Q8IWD4 279 aaPredicted RBP9.66□□□□□ -0.86
CPSF7-217ENST00000537162 CCDC112Q8NEF3 446 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 ITLN2Q8WWU7 325 aaPredicted RBP9.66□□□□□ -0.86
CPSF7-217ENST00000537162 CENPTQ96BT3 561 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 SMR3AQ99954 134 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 MBNL1Q9NR56 388 aaKnown RBP9.66□□□□□ -0.86
CPSF7-217ENST00000537162 DLL4Q9NR61 685 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 RPH3AQ9Y2J0 694 aaPredicted RBP9.66□□□□□ -0.86
CPSF7-217ENST00000537162 PCDHGB6Q9Y5F9 930 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 FADS3Q9Y5Q0 445 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 KLF2Q9Y5W3 355 aaPredicted RBP9.66□□□□□ -0.86
CPSF7-217ENST00000537162 CHD5Q8TDI0 1954 aa9.66□□□□□ -0.86
CPSF7-217ENST00000537162 PRRC2AP48634 2157 aaKnown RBP9.65□□□□□ -0.86
CPSF7-217ENST00000537162 ZNF233A6NK53 670 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 B4DGG1 531 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 C19orf84I3L1E1 186 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 M0QYT0 321 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 IRAK2O43187 625 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 DPM1O60762 260 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 LRCH4O75427 683 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 THRAP10827 490 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 ZNF28P17035 718 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 TNNI1P19237 187 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 SSTR2P30874 369 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 CHRNA3P32297 505 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms