RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 NKX2-4Q9H2Z4 354 aa5.9□□□□□ -1.46
CHD4-206ENST00000536999 CYP4F11Q9HBI6 524 aa5.9□□□□□ -1.46
CHD4-206ENST00000536999 SCUBE2Q9NQ36 999 aa5.9□□□□□ -1.46
CHD4-206ENST00000536999 GPRC5CQ9NQ84 441 aa5.9□□□□□ -1.46
CHD4-206ENST00000536999 TOPORSQ9NS56 1045 aaPredicted RBP5.9□□□□□ -1.46
CHD4-206ENST00000536999 GMIPQ9P107 970 aa5.9□□□□□ -1.46
CHD4-206ENST00000536999 MARCOQ9UEW3 520 aaPredicted RBP5.9□□□□□ -1.46
CHD4-206ENST00000536999 CPSF3Q9UKF6 684 aaKnown RBP5.9□□□□□ -1.46
CHD4-206ENST00000536999 CROTQ9UKG9 612 aa5.9□□□□□ -1.46
CHD4-206ENST00000536999 STAP1Q9ULZ2 295 aa5.9□□□□□ -1.46
CHD4-206ENST00000536999 ACOT9Q9Y305 439 aa5.9□□□□□ -1.46
CHD4-206ENST00000536999 AAR2Q9Y312 384 aaKnown RBP5.9□□□□□ -1.46
CHD4-206ENST00000536999 MTF2Q9Y483 593 aaPredicted RBP5.9□□□□□ -1.46
CHD4-206ENST00000536999 HEY1Q9Y5J3 304 aa5.9□□□□□ -1.46
CHD4-206ENST00000536999 ST14Q9Y5Y6 855 aa5.9□□□□□ -1.46
CHD4-206ENST00000536999 RIF1Q5UIP0 2472 aaKnown RBP5.9□□□□□ -1.47
CHD4-206ENST00000536999 LRRC37A2A6NM11 1700 aa5.9□□□□□ -1.47
CHD4-206ENST00000536999 ZFHX4Q86UP3 3567 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 A0A096LPK6 155 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 RNF103-CHMP3A0A140T963 221 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 TCRBV3S1A0A5B6 114 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 RBM47A0AV96 593 aaKnown RBP5.89□□□□□ -1.47
CHD4-206ENST00000536999 ISPDA4D126 451 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 TRIM64A6NGJ6 449 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 EIF4E1BA6NMX2 242 aaKnown RBP5.89□□□□□ -1.47
CHD4-206ENST00000536999 TISP43B9A030 160 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 M0QYV0 167 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 ZNF195O14628 629 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 TPP1O14773 563 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 CILPO75339 1184 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 F9P00740 461 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 C1QAP02745 245 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 ALDOAP04075 364 aaKnown RBP5.89□□□□□ -1.47
CHD4-206ENST00000536999 CLTBP09497 229 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 HOXC6P09630 235 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 KCNA2P16389 499 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 ZNF26P17031 533 aaPredicted RBP5.89□□□□□ -1.47
CHD4-206ENST00000536999 EIF2AK2P19525 551 aaKnown RBP5.89□□□□□ -1.47
CHD4-206ENST00000536999 CCNA2P20248 432 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 CDH3P22223 829 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 PAX3P23760 479 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 ATP5F1P24539 256 aaPredicted RBP5.89□□□□□ -1.47
CHD4-206ENST00000536999 DCKP27707 260 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 RBL1P28749 1068 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 CYP2C18P33260 490 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 MLH1P40692 756 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 PNPLA4P41247 253 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 GRIA2P42262 883 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 GPD2P43304 727 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 ATP6V0D1P61421 351 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 TFAMQ00059 246 aaKnown RBP5.89□□□□□ -1.47
CHD4-206ENST00000536999 POU4F1Q01851 419 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 OGDHQ02218 1023 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 TNK2Q07912 1038 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 MPP3Q13368 585 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 C16orf72Q14CZ0 275 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 FAM187BQ17R55 369 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 SMTNL2Q2TAL5 461 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 RFX4Q33E94 735 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 ARL13BQ3SXY8 428 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 MGAT5BQ3V5L5 792 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 MTERF2Q49AM1 385 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 PTPN20Q4JDL3 420 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 RALGPS1Q5JS13 557 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 KCNT1Q5JUK3 1230 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 TCHHL1Q5QJ38 904 aaPredicted RBP5.89□□□□□ -1.47
CHD4-206ENST00000536999 RBM48Q5RL73 367 aaKnown RBP5.89□□□□□ -1.47
CHD4-206ENST00000536999 NOL9Q5SY16 702 aaKnown RBP5.89□□□□□ -1.47
CHD4-206ENST00000536999 CCNYL2Q5T2Q4 361 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 ATAD3BQ5T9A4 648 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 OR6B2Q6IFH4 312 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 TAF2Q6P1X5 1199 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 KLHL35Q6PF15 583 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 IYDQ6PHW0 289 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 RFX8Q6ZV50 586 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 NCCRP1Q6ZVX7 275 aaPredicted RBP5.89□□□□□ -1.47
CHD4-206ENST00000536999 ARMCX2Q7L311 632 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 SLC26A9Q7LBE3 791 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 PLPPR4Q7Z2D5 763 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 RAB44Q7Z6P3 723 aaPredicted RBP5.89□□□□□ -1.47
CHD4-206ENST00000536999 GALNT7Q86SF2 657 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 TMEM135Q86UB9 458 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 GPR180Q86V85 440 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 SNX32Q86XE0 403 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 CHERPQ8IWX8 916 aaKnown RBP5.89□□□□□ -1.47
CHD4-206ENST00000536999 WDTC1Q8N5D0 677 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 ARRDC4Q8NCT1 418 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 OR2T34Q8NGX1 318 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 OR2T3Q8NH03 318 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 URGCPQ8TCY9 931 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 GIPC3Q8TF64 312 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 CHPT1Q8WUD6 406 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 RXFP2Q8WXD0 754 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 SEPT1Q8WYJ6 367 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 TFAP2CQ92754 450 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 CLPTM1LQ96KA5 538 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 HEXIM2Q96MH2 286 aaKnown RBP5.89□□□□□ -1.47
CHD4-206ENST00000536999 SORT1Q99523 831 aa5.89□□□□□ -1.47
CHD4-206ENST00000536999 ACO2Q99798 780 aaKnown RBP5.89□□□□□ -1.47
CHD4-206ENST00000536999 FAM118BQ9BPY3 351 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms