RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 EPHB6O15197 1021 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 AP5Z1O43299 807 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 GRAP2O75791 330 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 LSM8O95777 96 aaKnown RBP7.26□□□□□ -1.25
YBX3-206ENST00000536823 CAVIN2O95810 425 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 DLDP09622 509 aaKnown RBP7.26□□□□□ -1.25
YBX3-206ENST00000536823 SLC2A3P11169 496 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 CYP11B1P15538 503 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 ZNF18P17022 549 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 TFE3P19532 575 aaPredicted RBP7.26□□□□□ -1.25
YBX3-206ENST00000536823 HOXD12P35452 270 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 EIF4A3P38919 411 aaKnown RBP7.26□□□□□ -1.25
YBX3-206ENST00000536823 GABRB2P47870 512 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 DHPSP49366 369 aaPredicted RBP7.26□□□□□ -1.25
YBX3-206ENST00000536823 KLK7P49862 253 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 COPB1P53618 953 aaKnown RBP7.26□□□□□ -1.25
YBX3-206ENST00000536823 LIMK1P53667 647 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 ATXN1P54253 815 aaKnown RBP7.26□□□□□ -1.25
YBX3-206ENST00000536823 LINC00310P59036 64 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 NOMO3P69849 1222 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 ARID5AQ03989 594 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 LRRC14Q15048 493 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 FNDC3BQ53EP0 1204 aaKnown RBP7.26□□□□□ -1.25
YBX3-206ENST00000536823 MS4A13Q5J8X5 152 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 TAF3Q5VWG9 929 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 LYSMD4Q5XG99 296 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 MBLAC2Q68D91 279 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 TCEAL6Q6IPX3 200 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 SERPINA13PQ6UXR4 307 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 CHST9Q7L1S5 443 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 NOP9Q86U38 636 aaKnown RBP7.26□□□□□ -1.25
YBX3-206ENST00000536823 ADIPOR2Q86V24 386 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 ZDHHC17Q8IUH5 632 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 MFN1Q8IWA4 741 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 TMEFF1Q8IYR6 380 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 LGI2Q8N0V4 545 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 DEFB106AQ8N104 65 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 AHI1Q8N157 1196 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 AOPEPQ8N6M6 819 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 FRMD1Q8N878 549 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 ATP6V0D2Q8N8Y2 350 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 ANKRD20A12PQ8NF67 263 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 FIBINQ8TAL6 211 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 TCEAL3Q969E4 200 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 ERLEC1Q96DZ1 483 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 LMLNQ96KR4 655 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 MKRN2Q9H000 416 aaKnown RBP7.26□□□□□ -1.25
YBX3-206ENST00000536823 SLC6A17Q9H1V8 727 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 TMEM245Q9H330 911 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 SYNCQ9H7C4 482 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 FBRSQ9HAH7 460 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 FAM207AQ9NSI2 230 aaPredicted RBP7.26□□□□□ -1.25
YBX3-206ENST00000536823 RRN3Q9NYV6 651 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 USP36Q9P275 1121 aaKnown RBP7.26□□□□□ -1.25
YBX3-206ENST00000536823 LIMA1Q9UHB6 759 aaKnown RBP7.26□□□□□ -1.25
YBX3-206ENST00000536823 NOCTQ9UK39 431 aaKnown RBP7.26□□□□□ -1.25
YBX3-206ENST00000536823 CEP192Q8TEP8 1941 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 IGF2RP11717 2491 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 SYNJ2BP-COX16A0A087WUM0 186 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 LNP1A1A4G5 178 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 KCNU1A8MYU2 1149 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 F5H5T6 163 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 SYNCRIPO60506 623 aaKnown RBP7.25□□□□□ -1.25
YBX3-206ENST00000536823 LUC7L3O95232 432 aaKnown RBP7.25□□□□□ -1.25
YBX3-206ENST00000536823 ASLP04424 464 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 ATP5BP06576 529 aaKnown RBP7.25□□□□□ -1.25
YBX3-206ENST00000536823 EPHX1P07099 455 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 POLR2EP19388 210 aaKnown RBP7.25□□□□□ -1.25
YBX3-206ENST00000536823 TACR2P21452 398 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 GLDCP23378 1020 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 CCR1P32246 355 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 CD70P32970 193 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 SOX5P35711 763 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 DPP6P42658 865 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 MATKP42679 507 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 PTGER3P43115 390 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 COPAP53621 1224 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 JAM2P57087 298 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 POLR2FP61218 127 aaKnown RBP7.25□□□□□ -1.25
YBX3-206ENST00000536823 SLC6A3Q01959 620 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 RPL6Q02878 288 aaKnown RBP7.25□□□□□ -1.25
YBX3-206ENST00000536823 LMAN2Q12907 356 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 CAMK2GQ13555 558 aaPredicted RBP7.25□□□□□ -1.25
YBX3-206ENST00000536823 CDH18Q13634 790 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 NCAPHQ15003 741 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 SYCP1Q15431 976 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 RABGAP1LQ5R372 815 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 STPG1Q5TH74 334 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 OTUD1Q5VV17 481 aaPredicted RBP7.25□□□□□ -1.25
YBX3-206ENST00000536823 NAA35Q5VZE5 725 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 RAP1GAP2Q684P5 730 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 ARMCX6Q7L4S7 300 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 APTXQ7Z2E3 356 aaKnown RBP7.25□□□□□ -1.25
YBX3-206ENST00000536823 ZNF677Q86XU0 584 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 XYLT1Q86Y38 959 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 SYT12Q8IV01 421 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 CCDC117Q8IWD4 279 aaPredicted RBP7.25□□□□□ -1.25
YBX3-206ENST00000536823 SPACA3Q8IXA5 215 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 MSANTD4Q8NCY6 345 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 OR2T3Q8NH03 318 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms