RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 A0A1W2PR77 199 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 KCNK3O14649 394 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 VILLO15195 856 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 LRCH4O75427 683 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 RNF8O76064 485 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 MIPP30301 263 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 MAT2AP31153 395 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 DNA2P51530 1060 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 GEMIN4P57678 1058 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 YBEYP58557 167 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 TPI1P60174 286 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 ERMARDQ5T6L9 678 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 LEKR1Q6ZMV7 388 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 DBX2Q6ZNG2 339 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 KIAA1328Q86T90 577 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 PLPP6Q8IY26 295 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 UMODL1-AS1Q8N2C9 162 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 ACRBPQ8NEB7 543 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 ARHGEF26Q96DR7 871 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 HMCESQ96FZ2 354 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 DHX35Q9H5Z1 703 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 CTTNBP2NLQ9P2B4 639 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 UVRAGQ9P2Y5 699 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 HECAQ9UBI9 543 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 FRYQ5TBA9 3013 aa18.17■□□□□ 0.5
TNFRSF1A-209ENST00000536717 SPAARA0A1B0GVQ0 90 aa18.17■□□□□ 0.5
TNFRSF1A-209ENST00000536717 RASA4BC9J798 803 aa18.17■□□□□ 0.5
TNFRSF1A-209ENST00000536717 FGF10O15520 208 aaPredicted RBP18.17■□□□□ 0.5
TNFRSF1A-209ENST00000536717 RASA4O43374 803 aa18.17■□□□□ 0.5
TNFRSF1A-209ENST00000536717 CD38P28907 300 aa18.17■□□□□ 0.5
TNFRSF1A-209ENST00000536717 HTR7P34969 479 aa18.17■□□□□ 0.5
TNFRSF1A-209ENST00000536717 ERN2Q76MJ5 926 aaKnown RBP18.17■□□□□ 0.5
TNFRSF1A-209ENST00000536717 PRPF39Q86UA1 669 aaKnown RBP18.17■□□□□ 0.5
TNFRSF1A-209ENST00000536717 NAXDQ8IW45 347 aa18.17■□□□□ 0.5
TNFRSF1A-209ENST00000536717 RHOT2Q8IXI1 618 aa18.17■□□□□ 0.5
TNFRSF1A-209ENST00000536717 SERAC1Q96JX3 654 aa18.17■□□□□ 0.5
TNFRSF1A-209ENST00000536717 KCTD15Q96SI1 283 aaPredicted RBP18.17■□□□□ 0.5
TNFRSF1A-209ENST00000536717 DESI2Q9BSY9 194 aa18.17■□□□□ 0.5
TNFRSF1A-209ENST00000536717 HDAC8Q9BY41 377 aa18.17■□□□□ 0.5
TNFRSF1A-209ENST00000536717 PREBQ9HCU5 417 aa18.17■□□□□ 0.5
TNFRSF1A-209ENST00000536717 DYRK4Q9NR20 520 aa18.17■□□□□ 0.5
TNFRSF1A-209ENST00000536717 AASDHPPTQ9NRN7 309 aa18.17■□□□□ 0.5
TNFRSF1A-209ENST00000536717 ASPMQ8IZT6 3477 aa18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 ZSCAN5CA6NGD5 496 aaPredicted RBP18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 H0Y8X5 98 aa18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 CBFA2T3O75081 653 aa18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 GKP32189 559 aa18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 VAV2P52735 878 aa18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 SHC2P98077 582 aa18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 SERINC3Q13530 473 aa18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 ZNF423Q2M1K9 1284 aa18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 PARP15Q460N3 678 aa18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 NAPEPLDQ6IQ20 393 aa18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 ZNF354CQ86Y25 554 aa18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 OR2AP1Q8NGE2 309 aa18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 OR6K2Q8NGY2 324 aa18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 ZNF564Q8TBZ8 553 aaPredicted RBP18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 RFFLQ8WZ73 363 aa18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 PPP1R16AQ96I34 528 aa18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 ZDHHC6Q9H6R6 413 aa18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 LRRC19Q9H756 370 aa18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 ANAPC7Q9UJX3 599 aa18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 WASF3Q9UPY6 502 aa18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 REXO2Q9Y3B8 237 aaKnown RBP18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 PCDHGB2Q9Y5G2 931 aa18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 PTPRBP23467 1997 aa18.16■□□□□ 0.5
TNFRSF1A-209ENST00000536717 EEF2KO00418 725 aaKnown RBP18.15■□□□□ 0.5
TNFRSF1A-209ENST00000536717 BUB1O43683 1085 aa18.15■□□□□ 0.5
TNFRSF1A-209ENST00000536717 PRPSAP2O60256 369 aa18.15■□□□□ 0.5
TNFRSF1A-209ENST00000536717 TMCC1O94876 653 aa18.15■□□□□ 0.5
TNFRSF1A-209ENST00000536717 GSRP00390 522 aa18.15■□□□□ 0.5
TNFRSF1A-209ENST00000536717 ITGB7P26010 798 aa18.15■□□□□ 0.5
TNFRSF1A-209ENST00000536717 C21orf59P57076 290 aa18.15■□□□□ 0.5
TNFRSF1A-209ENST00000536717 SIM1P81133 766 aaPredicted RBP18.15■□□□□ 0.5
TNFRSF1A-209ENST00000536717 CCDC15Q0P6D6 951 aa18.15■□□□□ 0.5
TNFRSF1A-209ENST00000536717 NEK5Q6P3R8 708 aa18.15■□□□□ 0.5
TNFRSF1A-209ENST00000536717 NETO2Q8NC67 525 aa18.15■□□□□ 0.5
TNFRSF1A-209ENST00000536717 CNTNAP3BQ96NU0 1288 aa18.15■□□□□ 0.5
TNFRSF1A-209ENST00000536717 CNTNAP3Q9BZ76 1288 aa18.15■□□□□ 0.5
TNFRSF1A-209ENST00000536717 ANGPTL2Q9UKU9 493 aa18.15■□□□□ 0.5
TNFRSF1A-209ENST00000536717 PCOLCE2Q9UKZ9 415 aa18.15■□□□□ 0.5
TNFRSF1A-209ENST00000536717 DMTF1Q9Y222 760 aa18.15■□□□□ 0.5
TNFRSF1A-209ENST00000536717 EPG5Q9HCE0 2579 aa18.15■□□□□ 0.5
TNFRSF1A-209ENST00000536717 GOLGA4Q13439 2230 aaKnown RBP18.15■□□□□ 0.5
TNFRSF1A-209ENST00000536717 WDFY3Q8IZQ1 3526 aa18.15■□□□□ 0.5
TNFRSF1A-209ENST00000536717 MYO1FO00160 1098 aa18.14■□□□□ 0.49
TNFRSF1A-209ENST00000536717 RNGTTO60942 597 aaKnown RBP18.14■□□□□ 0.49
TNFRSF1A-209ENST00000536717 TCF4P15884 667 aa18.14■□□□□ 0.49
TNFRSF1A-209ENST00000536717 IL1R2P27930 398 aa18.14■□□□□ 0.49
TNFRSF1A-209ENST00000536717 PCK1P35558 622 aa18.14■□□□□ 0.49
TNFRSF1A-209ENST00000536717 NUDT1P36639 197 aa18.14■□□□□ 0.49
TNFRSF1A-209ENST00000536717 NEK3P51956 506 aa18.14■□□□□ 0.49
TNFRSF1A-209ENST00000536717 SNRPD1P62314 119 aaKnown RBP18.14■□□□□ 0.49
TNFRSF1A-209ENST00000536717 FOXC1Q12948 553 aa18.14■□□□□ 0.49
TNFRSF1A-209ENST00000536717 HNRNPDQ14103 355 aaKnown RBP18.14■□□□□ 0.49
TNFRSF1A-209ENST00000536717 ACAP1Q15027 740 aa18.14■□□□□ 0.49
TNFRSF1A-209ENST00000536717 INO80DQ53TQ3 878 aaPredicted RBP18.14■□□□□ 0.49
TNFRSF1A-209ENST00000536717 PRAMEF14Q5SWL7 426 aa18.14■□□□□ 0.49
TNFRSF1A-209ENST00000536717 ATXN7L2Q5T6C5 722 aaPredicted RBP18.14■□□□□ 0.49
TNFRSF1A-209ENST00000536717 PARS2Q7L3T8 475 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms