RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 HECAQ9UBI9 543 aaPredicted RBP13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 APOBEC3BQ9UH17 382 aaKnown RBP13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 RWDD2AQ9UIY3 292 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SALL4Q9UJQ4 1053 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 DNAJC12Q9UKB3 198 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 HPCAL4Q9UM19 191 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 DOLKQ9UPQ8 538 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 FCF1Q9Y324 198 aaKnown RBP13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 KALRNO60229 2985 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SETXQ7Z333 2677 aaKnown RBP13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 GOLGA8SH3BPF8 625 aa13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 MUSKO15146 869 aa13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 TCEA3O75764 348 aa13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 ANXA6P08133 673 aa13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 TGM2P21980 687 aa13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 PON1P27169 355 aa13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 APBA1Q02410 837 aa13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 GNA12Q03113 381 aa13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 RAPGEF1Q13905 1077 aa13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 SPIDRQ14159 915 aa13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 ARL13BQ3SXY8 428 aa13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 OTUD1Q5VV17 481 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 ESRP1Q6NXG1 681 aaKnown RBP13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 CRTC1Q6UUV9 634 aa13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 COL26A1Q96A83 441 aa13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 C18orf8Q96DM3 657 aa13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 ATXN7L3BQ96GX2 97 aa13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 BMFQ96LC9 184 aa13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 HAPLN3Q96S86 360 aa13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 ASCL3Q9NQ33 180 aa13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 GPR27Q9NS67 375 aa13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 FLNBO75369 2602 aaKnown RBP13.2□□□□□ -0.3
TNFRSF1A-207ENST00000535958 IGLV3-10A0A075B6K4 115 aa13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 LY6G6EA0A0G2JKS1 128 aa13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 IGLON5A6NGN9 336 aa13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 C16orf96A6NNT2 1141 aa13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 KRIT1O00522 736 aa13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 PES1O00541 588 aaKnown RBP13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 TPP1O14773 563 aa13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 RAD51BO15315 384 aa13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 TFE3P19532 575 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 SCNN1AP37088 669 aa13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 SNRPD1P62314 119 aaKnown RBP13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 ZSCAN23Q3MJ62 389 aa13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 PRRT3Q5FWE3 981 aa13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 RWDD4Q6NW29 188 aaKnown RBP13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 IGF2-ASQ6U949 168 aa13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 CCDC81Q6ZN84 652 aa13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 FAM131BQ86XD5 332 aa13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 FAM114A1Q8IWE2 563 aa13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 WDR36Q8NI36 951 aaKnown RBP13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 CXorf40AQ8TE69 158 aa13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 SCG3Q8WXD2 468 aaKnown RBP13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 LENG8Q96PV6 779 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.19□□□□□ -0.36e-7■□□□□ 9.6
TNFRSF1A-207ENST00000535958 OSBPL1AQ9BXW6 950 aa13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 ANLNQ9NQW6 1124 aa13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 PCDHGA8Q9Y5G5 932 aa13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 U3KQA8 63 aa13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 ZNF462Q96JM2 2506 aa13.19□□□□□ -0.3
TNFRSF1A-207ENST00000535958 FAM170AA1A519 330 aa13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 EME2A4GXA9 379 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 RNF103O00237 685 aa13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 LZTS3O60299 673 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 PNMA6AP0CW24 399 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 C6P13671 934 aa13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 PRKCSHP14314 528 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 XPAP23025 273 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 MLLT3P42568 568 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 ARF5P84085 180 aa13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 RAD51Q06609 339 aa13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 LY6DQ14210 128 aa13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 FGL2Q14314 439 aa13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 ZNF805Q5CZA5 627 aa13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 FAXCQ5TGI0 409 aa13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 TAF3Q5VWG9 929 aa13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 PCSK4Q6UW60 755 aa13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 VPS36Q86VN1 386 aa13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 ZNF683Q8IZ20 524 aa13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 PHACTR4Q8IZ21 702 aa13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 OR6K2Q8NGY2 324 aa13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 ISG20Q96AZ6 181 aaKnown RBP13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 CAAP1Q9H8G2 361 aa13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 TMPRSS4Q9NRS4 437 aa13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 ITM2BQ9Y287 266 aa13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 ENTPD2Q9Y5L3 495 aa13.18□□□□□ -0.3
TNFRSF1A-207ENST00000535958 CCDC187A0A096LP49 1063 aa13.17□□□□□ -0.3
TNFRSF1A-207ENST00000535958 FOXN3O00409 490 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF1A-207ENST00000535958 TM7SF2O76062 418 aa13.17□□□□□ -0.3
TNFRSF1A-207ENST00000535958 TNFSF15O95150 251 aa13.17□□□□□ -0.3
TNFRSF1A-207ENST00000535958 LSM8O95777 96 aaKnown RBP13.17□□□□□ -0.3
TNFRSF1A-207ENST00000535958 GSRP00390 522 aa13.17□□□□□ -0.3
TNFRSF1A-207ENST00000535958 UGT2B4P06133 528 aa13.17□□□□□ -0.3
TNFRSF1A-207ENST00000535958 CYP11B1P15538 503 aa13.17□□□□□ -0.3
TNFRSF1A-207ENST00000535958 CLCN1P35523 988 aa13.17□□□□□ -0.3
TNFRSF1A-207ENST00000535958 FLT3P36888 993 aa13.17□□□□□ -0.3
TNFRSF1A-207ENST00000535958 ABL2P42684 1182 aa13.17□□□□□ -0.3
TNFRSF1A-207ENST00000535958 MAPKAPK2P49137 400 aa13.17□□□□□ -0.3
TNFRSF1A-207ENST00000535958 BLKP51451 505 aa13.17□□□□□ -0.3
TNFRSF1A-207ENST00000535958 ADKP55263 362 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms