RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 STARD3Q14849 445 aa16.47■□□□□ 0.23
VAMP1-205ENST00000535927 ARMC3Q5W041 872 aa16.47■□□□□ 0.23
VAMP1-205ENST00000535927 C8orf74Q6P047 294 aa16.47■□□□□ 0.23
VAMP1-205ENST00000535927 LINGO4Q6UY18 593 aa16.47■□□□□ 0.23
VAMP1-205ENST00000535927 SRLQ86TD4 932 aa16.47■□□□□ 0.23
VAMP1-205ENST00000535927 KLHDC8BQ8IXV7 354 aa16.47■□□□□ 0.23
VAMP1-205ENST00000535927 CHPFQ8IZ52 775 aa16.47■□□□□ 0.23
VAMP1-205ENST00000535927 SIX5Q8N196 739 aa16.47■□□□□ 0.23
VAMP1-205ENST00000535927 CNTD1Q8N815 330 aa16.47■□□□□ 0.23
VAMP1-205ENST00000535927 SPOCK2Q92563 424 aa16.47■□□□□ 0.23
VAMP1-205ENST00000535927 RUBCNQ92622 972 aa16.47■□□□□ 0.23
VAMP1-205ENST00000535927 CLDN23Q96B33 292 aa16.47■□□□□ 0.23
VAMP1-205ENST00000535927 IMP4Q96G21 291 aaKnown RBP16.47■□□□□ 0.23
VAMP1-205ENST00000535927 RPL10LQ96L21 214 aaKnown RBP16.47■□□□□ 0.23
VAMP1-205ENST00000535927 ZNF641Q96N77 438 aaPredicted RBP16.47■□□□□ 0.23
VAMP1-205ENST00000535927 FAM118BQ9BPY3 351 aa16.47■□□□□ 0.23
VAMP1-205ENST00000535927 OSBPL1AQ9BXW6 950 aa16.47■□□□□ 0.23
VAMP1-205ENST00000535927 GBA3Q9H227 469 aa16.47■□□□□ 0.23
VAMP1-205ENST00000535927 NT5MQ9NPB1 228 aa16.47■□□□□ 0.23
VAMP1-205ENST00000535927 SLCO3A1Q9UIG8 710 aa16.47■□□□□ 0.23
VAMP1-205ENST00000535927 STON1Q9Y6Q2 735 aa16.47■□□□□ 0.23
VAMP1-205ENST00000535927 FAM170BA6NMN3 283 aa16.46■□□□□ 0.23
VAMP1-205ENST00000535927 INSIG1O15503 277 aa16.46■□□□□ 0.23
VAMP1-205ENST00000535927 ZBTB24O43167 697 aaPredicted RBP16.46■□□□□ 0.23
VAMP1-205ENST00000535927 SYNCRIPO60506 623 aaKnown RBP16.46■□□□□ 0.23
VAMP1-205ENST00000535927 TUBBP07437 444 aa16.46■□□□□ 0.23
VAMP1-205ENST00000535927 NFKBIAP25963 317 aa16.46■□□□□ 0.23
VAMP1-205ENST00000535927 GEMP55040 296 aa16.46■□□□□ 0.23
VAMP1-205ENST00000535927 RPL26P61254 145 aaKnown RBP16.46■□□□□ 0.23
VAMP1-205ENST00000535927 MESP2Q0VG99 397 aa16.46■□□□□ 0.23
VAMP1-205ENST00000535927 ZBTB17Q13105 803 aa16.46■□□□□ 0.23
VAMP1-205ENST00000535927 MPP3Q13368 585 aa16.46■□□□□ 0.23
VAMP1-205ENST00000535927 MYLK3Q32MK0 819 aa16.46■□□□□ 0.23
VAMP1-205ENST00000535927 JAMLQ86YT9 394 aa16.46■□□□□ 0.23
VAMP1-205ENST00000535927 CCDC33Q8N5R6 958 aa16.46■□□□□ 0.23
VAMP1-205ENST00000535927 NETO2Q8NC67 525 aa16.46■□□□□ 0.23
VAMP1-205ENST00000535927 TMIEQ8NEW7 156 aa16.46■□□□□ 0.23
VAMP1-205ENST00000535927 CYB5D2Q8WUJ1 264 aa16.46■□□□□ 0.23
VAMP1-205ENST00000535927 AGAP3Q96P47 875 aa16.46■□□□□ 0.23
VAMP1-205ENST00000535927 SRPK1Q96SB4 655 aaKnown RBP16.46■□□□□ 0.23
VAMP1-205ENST00000535927 HEPHQ9BQS7 1158 aa16.46■□□□□ 0.23
VAMP1-205ENST00000535927 ERP44Q9BS26 406 aa16.46■□□□□ 0.23
VAMP1-205ENST00000535927 FRMD8Q9BZ67 464 aaPredicted RBP16.46■□□□□ 0.23
VAMP1-205ENST00000535927 SCUBE2Q9NQ36 999 aa16.46■□□□□ 0.23
VAMP1-205ENST00000535927 LHX3Q9UBR4 397 aa16.46■□□□□ 0.23
VAMP1-205ENST00000535927 RSPH14Q9UHP6 348 aa16.46■□□□□ 0.23
VAMP1-205ENST00000535927 RPL26L1Q9UNX3 145 aaKnown RBP16.46■□□□□ 0.23
VAMP1-205ENST00000535927 SMAD6O43541 496 aaKnown RBP16.45■□□□□ 0.22
VAMP1-205ENST00000535927 RNASEH1O60930 286 aaKnown RBP16.45■□□□□ 0.22
VAMP1-205ENST00000535927 SOCS5O75159 536 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 ZNF821O75541 412 aaPredicted RBP16.45■□□□□ 0.22
VAMP1-205ENST00000535927 PRNPP04156 253 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 HLA-DQB2P05538 268 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 CHRM1P11229 460 aaPredicted RBP16.45■□□□□ 0.22
VAMP1-205ENST00000535927 ITIH2P19823 946 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 RPL22P35268 128 aaKnown RBP16.45■□□□□ 0.22
VAMP1-205ENST00000535927 MAGEA6P43360 314 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 TNNT3P45378 269 aaPredicted RBP16.45■□□□□ 0.22
VAMP1-205ENST00000535927 STK19P49842 368 aaPredicted RBP16.45■□□□□ 0.22
VAMP1-205ENST00000535927 SUOXP51687 545 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 GDF10P55107 478 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 SARNPP82979 210 aaKnown RBP16.45■□□□□ 0.22
VAMP1-205ENST00000535927 CAV1Q03135 178 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 ITKQ08881 620 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 C2orf54Q08AI8 447 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 CAMK2GQ13555 558 aaPredicted RBP16.45■□□□□ 0.22
VAMP1-205ENST00000535927 FAM46CQ5VWP2 391 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 EGFLAMQ63HQ2 1017 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 LINC00523Q86TU6 105 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 IL17RCQ8NAC3 791 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 TSEN2Q8NCE0 465 aaKnown RBP16.45■□□□□ 0.22
VAMP1-205ENST00000535927 OR8D1Q8WZ84 308 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 EZH1Q92800 747 aaPredicted RBP16.45■□□□□ 0.22
VAMP1-205ENST00000535927 PTPRN2Q92932 1015 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 TADA1Q96BN2 335 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 ATP13A3Q9H7F0 1226 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 TBC1D17Q9HA65 648 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 LMAN1LQ9HAT1 526 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 EIF2B3Q9NR50 452 aaKnown RBP16.45■□□□□ 0.22
VAMP1-205ENST00000535927 HECAQ9UBI9 543 aaPredicted RBP16.45■□□□□ 0.22
VAMP1-205ENST00000535927 FAM153AQ9UHL3 310 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 MMP17Q9ULZ9 603 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 SCML1Q9UN30 329 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 FCF1Q9Y324 198 aaKnown RBP16.45■□□□□ 0.22
VAMP1-205ENST00000535927 CKAP5Q14008 2032 aa16.45■□□□□ 0.22
VAMP1-205ENST00000535927 K7ERQ8 282 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 CD68P34810 354 aaPredicted RBP16.44■□□□□ 0.22
VAMP1-205ENST00000535927 TIE1P35590 1138 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 ADCY8P40145 1251 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 IL12RB1P42701 662 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 SCNN1BP51168 640 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 POLR2LP62875 67 aaKnown RBP16.44■□□□□ 0.22
VAMP1-205ENST00000535927 ZBTB16Q05516 673 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 SEMA5AQ13591 1074 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 C9orf64Q5T6V5 341 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 IER5LQ5T953 404 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 NAIF1Q69YI7 327 aaPredicted RBP16.44■□□□□ 0.22
VAMP1-205ENST00000535927 NCEH1Q6PIU2 408 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 TRIM67Q6ZTA4 783 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 SYT13Q7L8C5 426 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms