RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 LEFTY1O75610 366 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 PRNPP04156 253 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 WNT1P04628 370 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 TBC1D3HP0C7X1 549 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 DESP17661 470 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 CTSKP43235 329 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 RECQLP46063 649 aaPredicted RBP9.01□□□□□ -0.97
CHD4-204ENST00000535810 CCNHP51946 323 aaPredicted RBP9.01□□□□□ -0.97
CHD4-204ENST00000535810 SIM1P81133 766 aaPredicted RBP9.01□□□□□ -0.97
CHD4-204ENST00000535810 POLD3Q15054 466 aaPredicted RBP9.01□□□□□ -0.97
CHD4-204ENST00000535810 TBC1D3GQ6DHY5 549 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 TBC1D3CQ6IPX1 549 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 ADAT2Q7Z6V5 191 aaKnown RBP9.01□□□□□ -0.97
CHD4-204ENST00000535810 TRIM69Q86WT6 500 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 HOMEZQ8IX15 550 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 TBC1D3Q8IZP1 549 aaPredicted RBP9.01□□□□□ -0.97
CHD4-204ENST00000535810 ARFGAP1Q8N6T3 406 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 PCDH20Q8N6Y1 951 aaKnown RBP9.01□□□□□ -0.97
CHD4-204ENST00000535810 FNIP1Q8TF40 1166 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 SYN2Q92777 582 aaPredicted RBP9.01□□□□□ -0.97
CHD4-204ENST00000535810 ISG20Q96AZ6 181 aaKnown RBP9.01□□□□□ -0.97
CHD4-204ENST00000535810 ZNF653Q96CK0 615 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 SERAC1Q96JX3 654 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 PEBP4Q96S96 227 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 TRIM7Q9C029 511 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 MAGEH1Q9H213 219 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 PREBQ9HCU5 417 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 TM7SF3Q9NS93 570 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 ARHGAP20Q9P2F6 1191 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 CNOT8Q9UFF9 292 aaKnown RBP9.01□□□□□ -0.97
CHD4-204ENST00000535810 IL36AQ9UHA7 158 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 WASF3Q9UPY6 502 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 PCDHGB2Q9Y5G2 931 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 WASF2Q9Y6W5 498 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 ITPR1Q14643 2758 aa9.01□□□□□ -0.97
CHD4-204ENST00000535810 A0A1W2PR77 199 aa9□□□□□ -0.97
CHD4-204ENST00000535810 WASH4PA8MWX3 477 aa9□□□□□ -0.97
CHD4-204ENST00000535810 H0Y8X5 98 aa9□□□□□ -0.97
CHD4-204ENST00000535810 KCNK3O14649 394 aa9□□□□□ -0.97
CHD4-204ENST00000535810 FGF10O15520 208 aaPredicted RBP9□□□□□ -0.97
CHD4-204ENST00000535810 KDELR3O43731 214 aa9□□□□□ -0.97
CHD4-204ENST00000535810 GYPCP04921 128 aa9□□□□□ -0.97
CHD4-204ENST00000535810 MYBL1P10243 752 aa9□□□□□ -0.97
CHD4-204ENST00000535810 ITGB7P26010 798 aa9□□□□□ -0.97
CHD4-204ENST00000535810 CD38P28907 300 aa9□□□□□ -0.97
CHD4-204ENST00000535810 MAT2AP31153 395 aaKnown RBP9□□□□□ -0.97
CHD4-204ENST00000535810 HTR7P34969 479 aa9□□□□□ -0.97
CHD4-204ENST00000535810 CCT8P50990 548 aa9□□□□□ -0.97
CHD4-204ENST00000535810 DNA2P51530 1060 aa9□□□□□ -0.97
CHD4-204ENST00000535810 C21orf59P57076 290 aa9□□□□□ -0.97
CHD4-204ENST00000535810 GEMIN4P57678 1058 aaKnown RBP9□□□□□ -0.97
CHD4-204ENST00000535810 TPI1P60174 286 aa9□□□□□ -0.97
CHD4-204ENST00000535810 COPS2P61201 443 aa9□□□□□ -0.97
CHD4-204ENST00000535810 ZBED6P86452 979 aa9□□□□□ -0.97
CHD4-204ENST00000535810 FOXC1Q12948 553 aa9□□□□□ -0.97
CHD4-204ENST00000535810 HNRNPDQ14103 355 aaKnown RBP9□□□□□ -0.97
CHD4-204ENST00000535810 ZNF423Q2M1K9 1284 aa9□□□□□ -0.97
CHD4-204ENST00000535810 TDRD12Q587J7 1177 aaKnown RBP9□□□□□ -0.97
CHD4-204ENST00000535810 CARD16Q5EG05 197 aa9□□□□□ -0.97
CHD4-204ENST00000535810 NAPEPLDQ6IQ20 393 aa9□□□□□ -0.97
CHD4-204ENST00000535810 LEKR1Q6ZMV7 388 aa9□□□□□ -0.97
CHD4-204ENST00000535810 DBX2Q6ZNG2 339 aa9□□□□□ -0.97
CHD4-204ENST00000535810 CYP4V2Q6ZWL3 525 aaPredicted RBP9□□□□□ -0.97
CHD4-204ENST00000535810 ERN2Q76MJ5 926 aaKnown RBP9□□□□□ -0.97
CHD4-204ENST00000535810 UMODL1-AS1Q8N2C9 162 aa9□□□□□ -0.97
CHD4-204ENST00000535810 OR6K2Q8NGY2 324 aa9□□□□□ -0.97
CHD4-204ENST00000535810 PRR7Q8TB68 274 aa9□□□□□ -0.97
CHD4-204ENST00000535810 BAHD1Q8TBE0 780 aaPredicted RBP9□□□□□ -0.97
CHD4-204ENST00000535810 VOPP1Q96AW1 172 aa9□□□□□ -0.97
CHD4-204ENST00000535810 IQCDQ96DY2 449 aa9□□□□□ -0.97
CHD4-204ENST00000535810 TRIM11Q96F44 468 aa9□□□□□ -0.97
CHD4-204ENST00000535810 HMCESQ96FZ2 354 aa9□□□□□ -0.97
CHD4-204ENST00000535810 PPP1R16AQ96I34 528 aa9□□□□□ -0.97
CHD4-204ENST00000535810 HEPHQ9BQS7 1158 aa9□□□□□ -0.97
CHD4-204ENST00000535810 HDAC8Q9BY41 377 aa9□□□□□ -0.97
CHD4-204ENST00000535810 TM6SF2Q9BZW4 377 aa9□□□□□ -0.97
CHD4-204ENST00000535810 ISCUQ9H1K1 167 aa9□□□□□ -0.97
CHD4-204ENST00000535810 CATSPERBQ9H7T0 1116 aa9□□□□□ -0.97
CHD4-204ENST00000535810 DYRK4Q9NR20 520 aa9□□□□□ -0.97
CHD4-204ENST00000535810 AASDHPPTQ9NRN7 309 aa9□□□□□ -0.97
CHD4-204ENST00000535810 GPATCH2LQ9NWQ4 482 aa9□□□□□ -0.97
CHD4-204ENST00000535810 IFNKQ9P0W0 207 aa9□□□□□ -0.97
CHD4-204ENST00000535810 PCOLCE2Q9UKZ9 415 aa9□□□□□ -0.97
CHD4-204ENST00000535810 HPCAL4Q9UM19 191 aa9□□□□□ -0.97
CHD4-204ENST00000535810 CAPN11Q9UMQ6 739 aa9□□□□□ -0.97
CHD4-204ENST00000535810 AP4E1Q9UPM8 1137 aa9□□□□□ -0.97
CHD4-204ENST00000535810 BZW2Q9Y6E2 419 aaKnown RBP9□□□□□ -0.97
CHD4-204ENST00000535810 SCINQ9Y6U3 715 aa9□□□□□ -0.97
CHD4-204ENST00000535810 TMEM131Q92545 1883 aa9□□□□□ -0.97
CHD4-204ENST00000535810 A0A1W2PQU0 124 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 ZSCAN5CA6NGD5 496 aaPredicted RBP8.99□□□□□ -0.97
CHD4-204ENST00000535810 EIF3CLB5ME19 914 aaKnown RBP8.99□□□□□ -0.97
CHD4-204ENST00000535810 RASA4BC9J798 803 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 FLRT2O43155 660 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 RASA4O43374 803 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 BUB1O43683 1085 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 PCDHGA12O60330 932 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 RNGTTO60942 597 aaKnown RBP8.99□□□□□ -0.97
CHD4-204ENST00000535810 LRCH4O75427 683 aa8.99□□□□□ -0.97
CHD4-204ENST00000535810 TMCC1O94876 653 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms