RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 ZDHHC18Q9NUE0 388 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 BAIAP2L1Q9UHR4 511 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 VPS28Q9UK41 221 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 SORCS3Q9UPU3 1222 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 COL4A2P08572 1712 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 CFAP69A5D8W1 941 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 H7C0C1 242 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 TRIM24O15164 1050 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 MATN3O15232 486 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 RGS16O15492 202 aaPredicted RBP12.51□□□□□ -0.41
SCARB1-204ENST00000535005 MTSS1O43312 755 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 NEBLO76041 1014 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 CHN1P15882 459 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 STIP1P31948 543 aaKnown RBP12.51□□□□□ -0.41
SCARB1-204ENST00000535005 ATP5OP48047 213 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 PMS2P54278 862 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 E2F5Q15329 346 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 FUT11Q495W5 492 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 TIGD7Q6NT04 549 aaPredicted RBP12.51□□□□□ -0.41
SCARB1-204ENST00000535005 ARHGAP36Q6ZRI8 547 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 ADIPOR2Q86V24 386 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 ZC3H18Q86VM9 953 aaKnown RBP12.51□□□□□ -0.41
SCARB1-204ENST00000535005 APCDD1Q8J025 514 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 CCNYQ8ND76 341 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 ARMC2Q8NEN0 867 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 ATL2Q8NHH9 583 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 CFAP61Q8NHU2 1237 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 MAML1Q92585 1016 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 LGMNQ99538 433 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 ROPN1BQ9BZX4 212 aaPredicted RBP12.51□□□□□ -0.41
SCARB1-204ENST00000535005 ROPN1Q9HAT0 212 aaPredicted RBP12.51□□□□□ -0.41
SCARB1-204ENST00000535005 PDFQ9HBH1 243 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 USP29Q9HBJ7 922 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 INTS9Q9NV88 658 aaKnown RBP12.51□□□□□ -0.41
SCARB1-204ENST00000535005 MTRF1LQ9UGC7 380 aaKnown RBP12.51□□□□□ -0.41
SCARB1-204ENST00000535005 AMACRQ9UHK6 382 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 SPECC1L-ADORA2AF8WAN1 911 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 TTI1O43156 1089 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 TIMM44O43615 452 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 PEX11BO96011 259 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 NQO1P15559 274 aaKnown RBP12.5□□□□□ -0.41
SCARB1-204ENST00000535005 ATP5DP30049 168 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 CTHP32929 405 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 GRIA2P42262 883 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 VASPP50552 380 aaPredicted RBP12.5□□□□□ -0.41
SCARB1-204ENST00000535005 DR1Q01658 176 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 SULT2A1Q06520 285 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 SNX1Q13596 522 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 EIF4HQ15056 248 aaKnown RBP12.5□□□□□ -0.41
SCARB1-204ENST00000535005 GEN1Q17RS7 908 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 CMPK2Q5EBM0 449 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 TNFAIP8L3Q5GJ75 292 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 TMCO4Q5TGY1 634 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 TTC27Q6P3X3 843 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 DARS2Q6PI48 645 aaKnown RBP12.5□□□□□ -0.41
SCARB1-204ENST00000535005 CCDC33Q8N5R6 958 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 TERB1Q8NA31 727 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 NSMCE1Q8WV22 266 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 SLCO2A1Q92959 643 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 FERMT1Q9BQL6 677 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 PCYOX1Q9UHG3 505 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 VPS51Q9UID3 782 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 ZNF148Q9UQR1 794 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 PIAS3Q9Y6X2 628 aa12.5□□□□□ -0.41
SCARB1-204ENST00000535005 J3KR12 359 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 SUN1O94901 812 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 ASLP04424 464 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 RBL1P28749 1068 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 SOX9P48436 509 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 GALK1P51570 392 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 GEMIN4P57678 1058 aaKnown RBP12.49□□□□□ -0.41
SCARB1-204ENST00000535005 IFI35P80217 286 aaPredicted RBP12.49□□□□□ -0.41
SCARB1-204ENST00000535005 ARF5P84085 180 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 MESP2Q0VG99 397 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 AP1B1Q10567 949 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 HNRNPDQ14103 355 aaKnown RBP12.49□□□□□ -0.41
SCARB1-204ENST00000535005 RFTN1Q14699 578 aaPredicted RBP12.49□□□□□ -0.41
SCARB1-204ENST00000535005 GALNTL6Q49A17 601 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 CCDC38Q502W7 563 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 SLC44A4Q53GD3 710 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 INO80DQ53TQ3 878 aaPredicted RBP12.49□□□□□ -0.41
SCARB1-204ENST00000535005 TMEM215Q68D42 235 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 MBLAC2Q68D91 279 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 RETSATQ6NUM9 610 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 CCDC137Q6PK04 289 aaKnown RBP12.49□□□□□ -0.41
SCARB1-204ENST00000535005 RNF135Q8IUD6 432 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 TEX26Q8N6G2 289 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 TEX9Q8N6V9 391 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 HTR3CQ8WXA8 447 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 RTP4Q96DX8 246 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 P2RY13Q9BPV8 354 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 SP110Q9HB58 689 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 HEBP1Q9NRV9 189 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 CORO1CQ9ULV4 474 aaPredicted RBP12.49□□□□□ -0.41
SCARB1-204ENST00000535005 F5P12259 2224 aa12.49□□□□□ -0.41
SCARB1-204ENST00000535005 CBX4O00257 560 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 SNAP91O60641 907 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 KAT7O95251 611 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 CD160O95971 181 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 APODP05090 189 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms