RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 ZDHHC5Q9C0B5 715 aa21.69■■□□□ 1.06
PKP3-211ENST00000534401 PREBQ9HCU5 417 aa21.69■■□□□ 1.06
PKP3-211ENST00000534401 TMEM9BQ9NQ34 198 aa21.69■■□□□ 1.06
PKP3-211ENST00000534401 IMPACTQ9P2X3 320 aa21.69■■□□□ 1.06
PKP3-211ENST00000534401 EPN1Q9Y6I3 576 aaPredicted RBP21.69■■□□□ 1.06
PKP3-211ENST00000534401 DNAH14Q0VDD8 3507 aa21.69■■□□□ 1.06
PKP3-211ENST00000534401 SPTBN2O15020 2390 aa21.68■■□□□ 1.06
PKP3-211ENST00000534401 A0A0A6YYK5 440 aaPredicted RBP21.68■■□□□ 1.06
PKP3-211ENST00000534401 GJB3O75712 270 aa21.68■■□□□ 1.06
PKP3-211ENST00000534401 FSBPO95073 299 aa21.68■■□□□ 1.06
PKP3-211ENST00000534401 PEX11BO96011 259 aa21.68■■□□□ 1.06
PKP3-211ENST00000534401 CFIP05156 583 aa21.68■■□□□ 1.06
PKP3-211ENST00000534401 NUDT1P36639 197 aa21.68■■□□□ 1.06
PKP3-211ENST00000534401 DNA2P51530 1060 aa21.68■■□□□ 1.06
PKP3-211ENST00000534401 MMRN1Q13201 1228 aa21.68■■□□□ 1.06
PKP3-211ENST00000534401 MESDQ14696 234 aa21.68■■□□□ 1.06
PKP3-211ENST00000534401 RFTN1Q14699 578 aaPredicted RBP21.68■■□□□ 1.06
PKP3-211ENST00000534401 TMCO3Q6UWJ1 677 aa21.68■■□□□ 1.06
PKP3-211ENST00000534401 TMEM139Q8IV31 216 aa21.68■■□□□ 1.06
PKP3-211ENST00000534401 PCDH19Q8TAB3 1148 aa21.68■■□□□ 1.06
PKP3-211ENST00000534401 PPP1R16AQ96I34 528 aa21.68■■□□□ 1.06
PKP3-211ENST00000534401 GDAP1L1Q96MZ0 367 aa21.68■■□□□ 1.06
PKP3-211ENST00000534401 ZNF599Q96NL3 588 aa21.68■■□□□ 1.06
PKP3-211ENST00000534401 ZNF670Q9BS34 389 aa21.68■■□□□ 1.06
PKP3-211ENST00000534401 TM9SF3Q9HD45 589 aa21.68■■□□□ 1.06
PKP3-211ENST00000534401 IPO11Q9UI26 975 aaKnown RBP21.68■■□□□ 1.06
PKP3-211ENST00000534401 PCDHA13Q9Y5I0 950 aa21.68■■□□□ 1.06
PKP3-211ENST00000534401 C4orf47A7E2U8 309 aa21.67■■□□□ 1.06
PKP3-211ENST00000534401 AP1G1O43747 822 aa21.67■■□□□ 1.06
PKP3-211ENST00000534401 NDUFA10O95299 355 aa21.67■■□□□ 1.06
PKP3-211ENST00000534401 SYPP08247 313 aa21.67■■□□□ 1.06
PKP3-211ENST00000534401 CYLC1P35663 651 aaPredicted RBP21.67■■□□□ 1.06
PKP3-211ENST00000534401 SLC1A1P43005 524 aa21.67■■□□□ 1.06
PKP3-211ENST00000534401 GRIA4P48058 902 aa21.67■■□□□ 1.06
PKP3-211ENST00000534401 PPP2CBP62714 309 aa21.67■■□□□ 1.06
PKP3-211ENST00000534401 PPP2CAP67775 309 aa21.67■■□□□ 1.06
PKP3-211ENST00000534401 PAFAH1B3Q15102 231 aaKnown RBP21.67■■□□□ 1.06
PKP3-211ENST00000534401 POM121L1PQ3SYA9 428 aa21.67■■□□□ 1.06
PKP3-211ENST00000534401 ZNF805Q5CZA5 627 aa21.67■■□□□ 1.06
PKP3-211ENST00000534401 ATXN7L2Q5T6C5 722 aaPredicted RBP21.67■■□□□ 1.06
PKP3-211ENST00000534401 ARHGAP36Q6ZRI8 547 aa21.67■■□□□ 1.06
PKP3-211ENST00000534401 LRRC49Q8IUZ0 686 aa21.67■■□□□ 1.06
PKP3-211ENST00000534401 GRIN3AQ8TCU5 1115 aa21.67■■□□□ 1.06
PKP3-211ENST00000534401 OSBPL1AQ9BXW6 950 aa21.67■■□□□ 1.06
PKP3-211ENST00000534401 DNAAF2Q9NVR5 837 aaKnown RBP21.67■■□□□ 1.06
PKP3-211ENST00000534401 DKK3Q9UBP4 350 aa21.67■■□□□ 1.06
PKP3-211ENST00000534401 TBC1D3DA0A087WVF3 549 aa21.66■■□□□ 1.06
PKP3-211ENST00000534401 TBC1D3IA0A087WXS9 549 aa21.66■■□□□ 1.06
PKP3-211ENST00000534401 TBC1D3EA0A087X179 549 aa21.66■■□□□ 1.06
PKP3-211ENST00000534401 TBC1D3KA0A087X1G2 549 aa21.66■■□□□ 1.06
PKP3-211ENST00000534401 TBC1D3FA6NER0 549 aaPredicted RBP21.66■■□□□ 1.06
PKP3-211ENST00000534401 C3orf70A6NLC5 250 aaPredicted RBP21.66■■□□□ 1.06
PKP3-211ENST00000534401 UPK3BL1B0FP48 263 aa21.66■■□□□ 1.06
PKP3-211ENST00000534401 TBC1D3LB9A6J9 549 aa21.66■■□□□ 1.06
PKP3-211ENST00000534401 UPK3BL2E5RIL1 263 aa21.66■■□□□ 1.06
PKP3-211ENST00000534401 MAFKO60675 156 aa21.66■■□□□ 1.06
PKP3-211ENST00000534401 TBC1D3HP0C7X1 549 aa21.66■■□□□ 1.06
PKP3-211ENST00000534401 GKP32189 559 aa21.66■■□□□ 1.06
PKP3-211ENST00000534401 AFF3P51826 1226 aaKnown RBP21.66■■□□□ 1.06
PKP3-211ENST00000534401 NEK3P51956 506 aa21.66■■□□□ 1.06
PKP3-211ENST00000534401 RHOAP61586 193 aa21.66■■□□□ 1.06
PKP3-211ENST00000534401 RACK1P63244 317 aaKnown RBP21.66■■□□□ 1.06
PKP3-211ENST00000534401 NSUN2Q08J23 767 aaKnown RBP eCLIP21.66■■□□□ 1.06
PKP3-211ENST00000534401 ANKRD20A8PQ5CZ79 823 aa21.66■■□□□ 1.06
PKP3-211ENST00000534401 TBC1D3GQ6DHY5 549 aa21.66■■□□□ 1.06
PKP3-211ENST00000534401 TBC1D3CQ6IPX1 549 aa21.66■■□□□ 1.06
PKP3-211ENST00000534401 ZNF354CQ86Y25 554 aa21.66■■□□□ 1.06
PKP3-211ENST00000534401 TBC1D3Q8IZP1 549 aaPredicted RBP21.66■■□□□ 1.06
PKP3-211ENST00000534401 NETO2Q8NC67 525 aa21.66■■□□□ 1.06
PKP3-211ENST00000534401 HCAR2Q8TDS4 363 aa21.66■■□□□ 1.06
PKP3-211ENST00000534401 MIR1-1HGQ9H1L0 117 aa21.66■■□□□ 1.06
PKP3-211ENST00000534401 ZDHHC6Q9H6R6 413 aa21.66■■□□□ 1.06
PKP3-211ENST00000534401 FSCN3Q9NQT6 498 aa21.66■■□□□ 1.06
PKP3-211ENST00000534401 SHROOM3Q8TF72 1996 aa21.65■■□□□ 1.06
PKP3-211ENST00000534401 A0A1W2PR77 199 aa21.65■■□□□ 1.06
PKP3-211ENST00000534401 FAM47DPA6NHR8 397 aa21.65■■□□□ 1.06
PKP3-211ENST00000534401 SOWAHDA6NJG2 315 aa21.65■■□□□ 1.06
PKP3-211ENST00000534401 IGSF6O95976 241 aa21.65■■□□□ 1.06
PKP3-211ENST00000534401 ADRB3P13945 408 aa21.65■■□□□ 1.06
PKP3-211ENST00000534401 KDELR1P24390 212 aa21.65■■□□□ 1.06
PKP3-211ENST00000534401 SERPINB6P35237 376 aa21.65■■□□□ 1.06
PKP3-211ENST00000534401 SSR1P43307 286 aaKnown RBP21.65■■□□□ 1.06
PKP3-211ENST00000534401 GRIK2Q13002 908 aa21.65■■□□□ 1.06
PKP3-211ENST00000534401 KRT81Q14533 505 aa21.65■■□□□ 1.06
PKP3-211ENST00000534401 TMCO4Q5TGY1 634 aa21.65■■□□□ 1.06
PKP3-211ENST00000534401 RAD9BQ6WBX8 426 aa21.65■■□□□ 1.06
PKP3-211ENST00000534401 PARS2Q7L3T8 475 aaKnown RBP21.65■■□□□ 1.06
PKP3-211ENST00000534401 MAP7D3Q8IWC1 876 aa21.65■■□□□ 1.06
PKP3-211ENST00000534401 PQLC3Q8N755 202 aa21.65■■□□□ 1.06
PKP3-211ENST00000534401 KCTD6Q8NC69 237 aa21.65■■□□□ 1.06
PKP3-211ENST00000534401 RAPGEF5Q92565 580 aa21.65■■□□□ 1.06
PKP3-211ENST00000534401 RAB7BQ96AH8 199 aa21.65■■□□□ 1.06
PKP3-211ENST00000534401 PSKH2Q96QS6 385 aa21.65■■□□□ 1.06
PKP3-211ENST00000534401 DYRK4Q9NR20 520 aa21.65■■□□□ 1.06
PKP3-211ENST00000534401 DMTF1Q9Y222 760 aa21.65■■□□□ 1.06
PKP3-211ENST00000534401 REXO2Q9Y3B8 237 aaKnown RBP21.65■■□□□ 1.06
PKP3-211ENST00000534401 FADS3Q9Y5Q0 445 aa21.65■■□□□ 1.06
PKP3-211ENST00000534401 TSPAN11A1L157 253 aa21.64■■□□□ 1.05
PKP3-211ENST00000534401 RCCD1A6NED2 376 aa21.64■■□□□ 1.05
PKP3-211ENST00000534401 C16orf96A6NNT2 1141 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms