RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	TAGAP	Q8N103	731 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	AVL9	Q8NBF6	648 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	KCTD6	Q8NC69	237 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	MSANTD4	Q8NCY6	345 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	ETNPPL	Q8TBG4	499 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	HMGB4	Q8WW32	186 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	OVCA2	Q8WZ82	227 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	ZFYVE19	Q96K21	471 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	WDR24	Q96S15	920 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	EYA3	Q99504	573 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	NCAPG	Q9BPX3	1015 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	GPATCH1	Q9BRR8	931 aa	Known RBP	4.96	□□□□□ -1.62
ATM-223	ENST00000533979	DESI2	Q9BSY9	194 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	SAP30L	Q9HAJ7	183 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	CNOT7	Q9UIV1	285 aa	Known RBP	4.96	□□□□□ -1.62
ATM-223	ENST00000533979	NFU1	Q9UMS0	254 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	PCDHGB5	Q9Y5G0	923 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.96	□□□□□ -1.62
ATM-223	ENST00000533979	LYVE1	Q9Y5Y7	322 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	ABCC2	Q92887	1545 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	STRC	Q7RTU9	1775 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	KDM3A	Q9Y4C1	1321 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	NPIPB15	A6NHN6	443 aa	Predicted RBP	4.95	□□□□□ -1.62
ATM-223	ENST00000533979	TTC34	A8MYJ7	566 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	KIF28P	B7ZC32	967 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	C19orf81	C9J6K1	198 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	PEX12	O00623	359 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	SH2B2	O14492	632 aa	Predicted RBP	4.95	□□□□□ -1.62
ATM-223	ENST00000533979	TNPO2	O14787	897 aa	Known RBP	4.95	□□□□□ -1.62
ATM-223	ENST00000533979	GUCY1B2	O75343	617 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	CCNDBP1	O95273	360 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	SCG2	P13521	617 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	ATP6V1B1	P15313	513 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	ME1	P48163	572 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	C1QTNF8	P60827	252 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
ATM-223	ENST00000533979	CAMK1	Q14012	370 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	NFIL3	Q16649	462 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	SLC9C1	Q4G0N8	1177 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	GLIPR1L2	Q4G1C9	344 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	C1orf141	Q5JVX7	400 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	IL27RA	Q6UWB1	636 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	IKBIP	Q70UQ0	350 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	RTL10	Q7L3V2	364 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	PIP4P1	Q86T03	277 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
ATM-223	ENST00000533979	CEP57L1	Q8IYX8	460 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	CARNMT1	Q8N4J0	409 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	NRAC	Q8N912	160 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	LSM14A	Q8ND56	463 aa	Known RBP	4.95	□□□□□ -1.62
ATM-223	ENST00000533979	LINS1	Q8NG48	757 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	SNX21	Q969T3	373 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	NUDT22	Q9BRQ3	303 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	PLEKHA2	Q9HB19	425 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	TMLHE	Q9NVH6	421 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	HCFC1R1	Q9NWW0	138 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	MTRR	Q9UBK8	725 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	MORF4L1	Q9UBU8	362 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	RUSC2	Q8N2Y8	1516 aa		4.95	□□□□□ -1.62
ATM-223	ENST00000533979	MAP3K4	Q9Y6R4	1608 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	GPRASP1	Q5JY77	1395 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	C16orf96	A6NNT2	1141 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	ADAM10	O14672	748 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	TSPAN4	O14817	238 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	TGDS	O95455	350 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	LARGE1	O95461	756 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	NTN1	O95631	604 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	ABCD1	P33897	745 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	BSG	P35613	385 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	EIF2D	P41214	584 aa	Known RBP	4.94	□□□□□ -1.62
ATM-223	ENST00000533979	POLG	P54098	1239 aa	Predicted RBP	4.94	□□□□□ -1.62
ATM-223	ENST00000533979	WDR5	P61964	334 aa	Known RBP	4.94	□□□□□ -1.62
ATM-223	ENST00000533979	SEMA3B	Q13214	749 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	ASIC2	Q16515	512 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	FAM90A2P	Q658T7	463 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	CYP20A1	Q6UW02	462 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	TRABD2A	Q86V40	505 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	TTC30A	Q86WT1	665 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	ANKRD13B	Q86YJ7	626 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	OR8H3	Q8N146	312 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.94	□□□□□ -1.62
ATM-223	ENST00000533979	APPL2	Q8NEU8	664 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	MPLKIP	Q8TAP9	179 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	ZCCHC10	Q8TBK6	192 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	NR1H4	Q96RI1	486 aa	Predicted RBP	4.94	□□□□□ -1.62
ATM-223	ENST00000533979	TRMO	Q9BU70	441 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	MECR	Q9BV79	373 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	TM2D2	Q9BX73	214 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	C2orf40	Q9H1Z8	148 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	RANBP17	Q9H2T7	1088 aa	Known RBP	4.94	□□□□□ -1.62
ATM-223	ENST00000533979	RABEP2	Q9H5N1	569 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	RMI1	Q9H9A7	625 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	VEZT	Q9HBM0	779 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	LIN7C	Q9NUP9	197 aa	Known RBP	4.94	□□□□□ -1.62
ATM-223	ENST00000533979	POT1	Q9NUX5	634 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	SEL1L	Q9UBV2	794 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	GDA	Q9Y2T3	454 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	HS3ST3B1	Q9Y662	390 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	4.94	□□□□□ -1.62
ATM-223	ENST00000533979	SPATA31A5	Q5VU36	1347 aa		4.94	□□□□□ -1.62

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