RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 SETD1AO15047 1707 aaKnown RBP11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 NUP188Q5SRE5 1749 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 H3BM21 787 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 IFNA14P01570 189 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 EPHX1P07099 455 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 MMP8P22894 467 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 ADRA1DP25100 572 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 CLK1P49759 484 aaKnown RBP11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 PEX5P50542 639 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 WLSQ5T9L3 541 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 TTC33Q6PID6 262 aaPredicted RBP11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 FBXO39Q8N4B4 442 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 CCDC33Q8N5R6 958 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 INPP5DQ92835 1189 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 PCED1BQ96HM7 432 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 SH3GL1Q99961 368 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 TRMT61BQ9BVS5 477 aaKnown RBP11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 ABCG4Q9H172 646 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 SYBUQ9NX95 663 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 STMN3Q9NZ72 180 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 VAPBO95292 243 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 CLPTM1O96005 669 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 CYBAP13498 195 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 TNNI3P19429 210 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 EDNRBP24530 442 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 TBX2Q13207 712 aaPredicted RBP11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 LVRNQ6Q4G3 990 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 POTEHQ6S545 545 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 GPR141Q7Z602 305 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 CLEC4FQ8N1N0 589 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 KRT78Q8N1N4 520 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 OR56A4Q8NGH8 313 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 TUBGCP3Q96CW5 907 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 NMD3Q96D46 503 aaKnown RBP11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 PAFAH2Q99487 392 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 ADAM33Q9BZ11 813 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 MANSC1Q9H8J5 431 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 NDOR1Q9UHB4 597 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 SFMBT1Q9UHJ3 866 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 HAO1Q9UJM8 370 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 PCDHGC5Q9Y5F6 944 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 C1orf232A0A0U1RR37 186 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 AIM2O14862 343 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 HNRNPA1P09651 372 aaKnown RBP eCLIP11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 PCNAP12004 261 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 MLNP12872 115 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 MGAT1P26572 445 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 SKIV2L2P42285 1042 aaKnown RBP11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 CPA2P48052 419 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 PRIM2P49643 509 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 CLCN5P51795 746 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 UBE3AQ05086 875 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 PRSS55Q6UWB4 352 aaPredicted RBP11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 MICU2Q8IYU8 434 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 HERVK_113Q902F9 699 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 KAT2BQ92831 832 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 SGF29Q96ES7 293 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 TMBIM4Q9HC24 238 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 ETNK2Q9NVF9 386 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 NAALADL1Q9UQQ1 740 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 GPSM3Q9Y4H4 160 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 F8W810 466 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 FGF18O76093 207 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 POP4O95707 220 aaKnown RBP11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 STAU1O95793 577 aaKnown RBP11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 PYGMP11217 842 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 TPP2P29144 1249 aaPredicted RBP11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 HNRNPH3P31942 346 aaKnown RBP11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 RUNX1T1Q06455 604 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 SPIRE1Q08AE8 756 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 LRRC74AQ0VAA2 488 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 DPYSL3Q14195 570 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 CSHL1Q14406 222 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 UBXN2BQ14CS0 331 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 CRY1Q16526 586 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 FAM45BPQ6NSW5 357 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 FAM45AQ8TCE6 357 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 ELMO1Q92556 727 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 IRF7Q92985 503 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 MIEF2Q96C03 454 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 SAE1Q9UBE0 346 aaPredicted RBP11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 IRS2Q9Y4H2 1338 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 DHX15O43143 795 aaKnown RBP11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 UBOX5O94941 541 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 ANXA5P08758 320 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 L1CAMP32004 1257 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 DMC1Q14565 340 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 MORN1Q5T089 497 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 PRDM12Q9H4Q4 367 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 ZNF556Q9HAH1 456 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 MIEF1Q9NQG6 463 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 PSME2Q9UL46 239 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 LRCH1Q9Y2L9 728 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 GNG14A0A1W2PPG7 69 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 VPS4BO75351 444 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 OCM2P0CE71 109 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 OCMP0CE72 109 aaPredicted RBP11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 CDK7P50613 346 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 CHI3L2Q15782 390 aa11.38□□□□□ -0.59
AMBRA1-211ENST00000533727 CCDC103Q8IW40 242 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms