RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 TROVE2P10155 538 aaKnown RBP eCLIP12.1□□□□□ -0.47
CLP1-205ENST00000533682 IRF1P10914 325 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 MYL2P10916 166 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 TACR2P21452 398 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 GLDCP23378 1020 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 ALDH3A1P30838 453 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 ARRB2P32121 409 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 SPRP35270 261 aaPredicted RBP12.1□□□□□ -0.47
CLP1-205ENST00000533682 ATP5C1P36542 298 aaKnown RBP12.1□□□□□ -0.47
CLP1-205ENST00000533682 AVPR1AP37288 418 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 ARCN1P48444 511 aaKnown RBP12.1□□□□□ -0.47
CLP1-205ENST00000533682 GEMP55040 296 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 E2F5Q15329 346 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 PCID2Q5JVF3 399 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 KDELC1Q6UW63 502 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 TTC7BQ86TV6 843 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 C10orf107Q8IVU9 208 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 ARID3BQ8IVW6 561 aaPredicted RBP12.1□□□□□ -0.47
CLP1-205ENST00000533682 MFSD6LQ8IWD5 586 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 SPATA6LQ8N4H0 392 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 VPS39Q96JC1 886 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 CYP2S1Q96SQ9 504 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 PLCD4Q9BRC7 762 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 MCMBPQ9BTE3 642 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 TMEM120AQ9BXJ8 343 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 SAGE1Q9NXZ1 904 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 TBX21Q9UL17 535 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 SLC39A10Q9ULF5 831 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 ANAPC1Q9H1A4 1944 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 A0A096LPK6 155 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 PHGDHO43175 533 aaKnown RBP12.09□□□□□ -0.47
CLP1-205ENST00000533682 SERPINB3P29508 390 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 RENBPP51606 427 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 OCRLQ01968 901 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 SERINC3Q13530 473 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 PCLAFQ15004 111 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 RNF168Q8IYW5 571 aaPredicted RBP12.09□□□□□ -0.47
CLP1-205ENST00000533682 OR7D4Q8NG98 312 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 KLHL29Q96CT2 875 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 SPDL1Q96EA4 605 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 IMP4Q96G21 291 aaKnown RBP12.09□□□□□ -0.47
CLP1-205ENST00000533682 TTLL2Q9BWV7 592 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 SLC25A51Q9H1U9 297 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 CPSF2Q9P2I0 782 aaKnown RBP12.09□□□□□ -0.47
CLP1-205ENST00000533682 ZFP37Q9Y6Q3 630 aaPredicted RBP12.09□□□□□ -0.47
CLP1-205ENST00000533682 BUD23O43709 281 aaKnown RBP12.09□□□□□ -0.47
CLP1-205ENST00000533682 TSPAN3O60637 253 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 ZNF189O75820 626 aaPredicted RBP12.09□□□□□ -0.47
CLP1-205ENST00000533682 CSPG5O95196 566 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 PROCP04070 461 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 C2P06681 752 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 RPSAP08865 295 aaKnown RBP12.09□□□□□ -0.47
CLP1-205ENST00000533682 ACRP10323 421 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 FGF3P11487 239 aaPredicted RBP12.09□□□□□ -0.47
CLP1-205ENST00000533682 CSF2RAP15509 400 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 ARFIP2P53365 341 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 NAB1Q13506 487 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 PTPRCAPQ14761 206 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 SETDB1Q15047 1291 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 RBBP5Q15291 538 aaKnown RBP12.09□□□□□ -0.47
CLP1-205ENST00000533682 ANO4Q32M45 955 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 ZNF789Q5FWF6 425 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 MBLAC2Q68D91 279 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 ALYREFQ86V81 257 aaKnown RBP12.09□□□□□ -0.47
CLP1-205ENST00000533682 ZC3HC1Q86WB0 502 aaKnown RBP12.09□□□□□ -0.47
CLP1-205ENST00000533682 ZNF461Q8TAF7 563 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 ACMSDQ8TDX5 336 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 TOP1MTQ969P6 601 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 SLC22A12Q96S37 553 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 SEZ6LQ9BYH1 1024 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 ENTPD7Q9NQZ7 604 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 SMPD4Q9NXE4 827 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 UXTQ9UBK9 157 aaPredicted RBP12.09□□□□□ -0.47
CLP1-205ENST00000533682 DNMT3LQ9UJW3 386 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 KCTD3Q9Y597 815 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 CHD5Q8TDI0 1954 aa12.09□□□□□ -0.47
CLP1-205ENST00000533682 A8MUI8 341 aa12.08□□□□□ -0.48
CLP1-205ENST00000533682 KLF11O14901 512 aa12.08□□□□□ -0.48
CLP1-205ENST00000533682 GLRA3O75311 464 aa12.08□□□□□ -0.48
CLP1-205ENST00000533682 KRT16P08779 473 aa12.08□□□□□ -0.48
CLP1-205ENST00000533682 PIRTP0C851 137 aa12.08□□□□□ -0.48
CLP1-205ENST00000533682 RING1Q06587 406 aa12.08□□□□□ -0.48
CLP1-205ENST00000533682 SMARCB1Q12824 385 aa12.08□□□□□ -0.48
CLP1-205ENST00000533682 PLD1Q13393 1074 aa12.08□□□□□ -0.48
CLP1-205ENST00000533682 KYAT3Q6YP21 454 aaKnown RBP12.08□□□□□ -0.48
CLP1-205ENST00000533682 CLNKQ7Z7G1 428 aa12.08□□□□□ -0.48
CLP1-205ENST00000533682 RNF135Q8IUD6 432 aa12.08□□□□□ -0.48
CLP1-205ENST00000533682 GBP7Q8N8V2 638 aaPredicted RBP12.08□□□□□ -0.48
CLP1-205ENST00000533682 ARRDC2Q8TBH0 407 aa12.08□□□□□ -0.48
CLP1-205ENST00000533682 MICAL1Q8TDZ2 1067 aa12.08□□□□□ -0.48
CLP1-205ENST00000533682 NSMCE3Q96MG7 304 aa12.08□□□□□ -0.48
CLP1-205ENST00000533682 OXCT2Q9BYC2 517 aaPredicted RBP12.08□□□□□ -0.48
CLP1-205ENST00000533682 ARMCX1Q9P291 453 aa12.08□□□□□ -0.48
CLP1-205ENST00000533682 DCDC2Q9UHG0 476 aa12.08□□□□□ -0.48
CLP1-205ENST00000533682 TCAF1Q9Y4C2 921 aa12.08□□□□□ -0.48
CLP1-205ENST00000533682 F5H5T6 163 aa12.08□□□□□ -0.48
CLP1-205ENST00000533682 PSMD3O43242 534 aa12.08□□□□□ -0.48
CLP1-205ENST00000533682 SNNO75324 88 aaPredicted RBP12.08□□□□□ -0.48
CLP1-205ENST00000533682 HAUS5O94927 633 aa12.08□□□□□ -0.48
CLP1-205ENST00000533682 ABLIM3O94929 683 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms