RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 RFFLQ8WZ73 363 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 FGF11Q92914 225 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 NT5C3BQ969T7 300 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 FAM131CQ96AQ9 280 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 PGAP3Q96FM1 320 aaPredicted RBP8.91□□□□□ -0.98
COPB1-210ENST00000533533 CCDC42Q96M95 316 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 DNAJC7Q99615 494 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 CHP1Q99653 195 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 MRPL47Q9HD33 250 aaKnown RBP8.91□□□□□ -0.98
COPB1-210ENST00000533533 ARHGEF38Q9NXL2 777 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 SCINQ9Y6U3 715 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.9□□□□□ -0.98
COPB1-210ENST00000533533 SLC7A4O43246 635 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 BRINP1O60477 761 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 MAGEC1O60732 1142 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 RNF8O76064 485 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 MYBL1P10243 752 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 VAV1P15498 845 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 ACP1P24666 158 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 NUDT1P36639 197 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 SSR1P43307 286 aaKnown RBP8.9□□□□□ -0.98
COPB1-210ENST00000533533 METAP1P53582 386 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 SULT2A1Q06520 285 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 ZNF177Q13360 481 aaPredicted RBP8.9□□□□□ -0.98
COPB1-210ENST00000533533 SLC12A1Q13621 1099 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 PROX2Q3B8N5 592 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 PLEKHA7Q6IQ23 1121 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 RWDD4Q6NW29 188 aaKnown RBP8.9□□□□□ -0.98
COPB1-210ENST00000533533 STRADAQ7RTN6 431 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 TFAP2DQ7Z6R9 452 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 CCAR2Q8N163 923 aaKnown RBP8.9□□□□□ -0.98
COPB1-210ENST00000533533 CCDC185Q8N715 623 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 DCBLD1Q8N8Z6 715 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 SPC24Q8NBT2 197 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 FRS2Q8WU20 508 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 MRFAP1L1Q96HT8 127 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 FCRL3Q96P31 734 aaPredicted RBP8.9□□□□□ -0.98
COPB1-210ENST00000533533 PRMT1Q99873 361 aaKnown RBP8.9□□□□□ -0.98
COPB1-210ENST00000533533 CNPY3Q9BT09 278 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 THAP2Q9H0W7 228 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 ISCUQ9H1K1 167 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 KDM4CQ9H3R0 1056 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 NHEJ1Q9H9Q4 299 aaPredicted RBP8.9□□□□□ -0.98
COPB1-210ENST00000533533 ANLNQ9NQW6 1124 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 SPTLC3Q9NUV7 552 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 TMEM51Q9NW97 253 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 MPP6Q9NZW5 540 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 CLCA2Q9UQC9 943 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 DMTF1Q9Y222 760 aa8.9□□□□□ -0.98
COPB1-210ENST00000533533 TEX51A0A1B0GUA7 166 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 A0A1B0GVM2 712 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 TCRBV5S1A1TA0A578 114 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 TCAF2A6NFQ2 919 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 PLRG1O43660 514 aaKnown RBP8.89□□□□□ -0.99
COPB1-210ENST00000533533 SIGLEC6O43699 453 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 CNTN5O94779 1100 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 ENDOD1O94919 500 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 RHOCP08134 193 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 H2AFZP0C0S5 128 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 GLDCP23378 1020 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 MAT2AP31153 395 aaKnown RBP8.89□□□□□ -0.99
COPB1-210ENST00000533533 HNRNPH3P31942 346 aaKnown RBP8.89□□□□□ -0.99
COPB1-210ENST00000533533 ADRA1BP35368 520 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 ACTN2P35609 894 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 IRAK1P51617 712 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 PLK1P53350 603 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 HDAC4P56524 1084 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 INSM1Q01101 510 aaPredicted RBP8.89□□□□□ -0.99
COPB1-210ENST00000533533 OGDHQ02218 1023 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 TBX2Q13207 712 aaPredicted RBP8.89□□□□□ -0.99
COPB1-210ENST00000533533 ZNF211Q13398 564 aaPredicted RBP8.89□□□□□ -0.99
COPB1-210ENST00000533533 STAT4Q14765 748 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 SLC18A3Q16572 532 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 TBC1D25Q3MII6 688 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 EFHC2Q5JST6 749 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 PPP1R15BQ5SWA1 713 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 TTC39BQ5VTQ0 682 aaPredicted RBP8.89□□□□□ -0.99
COPB1-210ENST00000533533 FAM46CQ5VWP2 391 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 H2AFVQ71UI9 128 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 GPR155Q7Z3F1 870 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 SLFN11Q7Z7L1 901 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 DSG4Q86SJ6 1040 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 TRIM69Q86WT6 500 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 CTNNBL1Q8WYA6 563 aaPredicted RBP8.89□□□□□ -0.99
COPB1-210ENST00000533533 OR8D1Q8WZ84 308 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 HAPLN3Q96S86 360 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 NUP85Q9BW27 656 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 TRIM7Q9C029 511 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 MUC3BQ9H195 1237 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 CTTNBP2NLQ9P2B4 639 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 PCSK1NQ9UHG2 260 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 SARDHQ9UL12 918 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 PPM1HQ9ULR3 514 aa8.89□□□□□ -0.99
COPB1-210ENST00000533533 DOCK4Q8N1I0 1966 aa8.88□□□□□ -0.99
COPB1-210ENST00000533533 UNC13CQ8NB66 2214 aa8.88□□□□□ -0.99
COPB1-210ENST00000533533 SSU72P8A0A1W2PR75 194 aa8.88□□□□□ -0.99
COPB1-210ENST00000533533 TMEM191CA6NGB0 347 aa8.88□□□□□ -0.99
COPB1-210ENST00000533533 TMEM110-MUSTN1A8MSY1 372 aa8.88□□□□□ -0.99
COPB1-210ENST00000533533 GOLGA6L6A8MZA4 724 aa8.88□□□□□ -0.99
COPB1-210ENST00000533533 PRAMEF26H0Y7S4 382 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms