RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 BHLHE22Q8NFJ8 381 aaPredicted RBP17.73■□□□□ 0.43
PHRF1-205ENST00000533464 SEMA6AQ9H2E6 1030 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 SNX8Q9Y5X2 465 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 C15orf38-AP3S2A0A0A6YYH1 394 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 H3BMM5 538 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 MTA2O94776 668 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 SMAD3P84022 425 aaKnown RBP17.73■□□□□ 0.43
PHRF1-205ENST00000533464 USP41Q3LFD5 358 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 FNBP1LQ5T0N5 605 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 ARPINQ7Z6K5 226 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 ALYREFQ86V81 257 aaKnown RBP17.73■□□□□ 0.43
PHRF1-205ENST00000533464 GRIN3AQ8TCU5 1115 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 RCOR3Q9P2K3 495 aaPredicted RBP17.73■□□□□ 0.43
PHRF1-205ENST00000533464 TRPC4Q9UBN4 977 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 FAM155BO75949 473 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 POLR2EP19388 210 aaKnown RBP17.73■□□□□ 0.43
PHRF1-205ENST00000533464 S100A3P33764 101 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 TTPAP49638 278 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 HADHBP55084 474 aaKnown RBP17.73■□□□□ 0.43
PHRF1-205ENST00000533464 SLC10A6Q3KNW5 377 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 ZNF614Q8N883 585 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 KCTD15Q96SI1 283 aaPredicted RBP17.73■□□□□ 0.43
PHRF1-205ENST00000533464 GLOD4Q9HC38 313 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 AHSPQ9NZD4 102 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 SNED1Q8TER0 1413 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 TBL1XO60907 577 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 OR4Q2P0C623 313 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 HNRNPLP14866 589 aaKnown RBP eCLIP17.73■□□□□ 0.43
PHRF1-205ENST00000533464 IL5RAQ01344 420 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 LIPMQ5VYY2 423 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 AMIGO3Q86WK7 504 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 C12orf42Q96LP6 360 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 TBCDQ9BTW9 1192 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 FOXO6A8MYZ6 492 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 RASSF9O75901 435 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 TKTP29401 623 aaKnown RBP17.72■□□□□ 0.43
PHRF1-205ENST00000533464 PSMD5Q16401 504 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 AFTPHQ6ULP2 937 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 CACNA2D2Q9NY47 1150 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 PADI3Q9ULW8 664 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 TDRKHQ9Y2W6 561 aaKnown RBP17.72■□□□□ 0.43
PHRF1-205ENST00000533464 ACSM2AQ08AH3 577 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 SFSWAPQ12872 951 aaKnown RBP17.72■□□□□ 0.43
PHRF1-205ENST00000533464 GALNT3Q14435 633 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 TAF5Q15542 800 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 ANKRD22Q5VYY1 191 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 ACSM2BQ68CK6 577 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 C12orf50Q8NA57 414 aaPredicted RBP17.72■□□□□ 0.43
PHRF1-205ENST00000533464 MTFMTQ96DP5 389 aaKnown RBP17.72■□□□□ 0.43
PHRF1-205ENST00000533464 C6orf203Q9P0P8 240 aaPredicted RBP17.72■□□□□ 0.43
PHRF1-205ENST00000533464 TCHHQ07283 1943 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 ATP6AP2A0A1C7CYW4 349 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 ATP6AP2O75787 350 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 PLCL1Q15111 1095 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 SLC1A5Q15758 541 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 ATAD1Q8NBU5 361 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 NLGN2Q8NFZ4 835 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 RGSL1A5PLK6 1076 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 C2P06681 752 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 SERPINA6P08185 405 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 UNGP13051 313 aaPredicted RBP17.72■□□□□ 0.43
PHRF1-205ENST00000533464 SMPD1P17405 629 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 PTGIRP43119 386 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 SNRPD1P62314 119 aaKnown RBP17.72■□□□□ 0.43
PHRF1-205ENST00000533464 USP4Q13107 963 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 ITGA7Q13683 1181 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 SETMARQ53H47 684 aaPredicted RBP17.72■□□□□ 0.43
PHRF1-205ENST00000533464 RMND5BQ96G75 393 aaPredicted RBP17.72■□□□□ 0.43
PHRF1-205ENST00000533464 MAML3Q96JK9 1138 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 PHACTR1Q9C0D0 580 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 DPEP3Q9H4B8 488 aa17.72■□□□□ 0.43
PHRF1-205ENST00000533464 BCLAF3A2AJT9 711 aaKnown RBP17.71■□□□□ 0.43
PHRF1-205ENST00000533464 AGPSO00116 658 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 BPGMP07738 259 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 ANXA5P08758 320 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 GSTM1P09488 218 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 TPSB2P20231 275 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 TPSAB1Q15661 275 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 SELENOMQ8WWX9 145 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 STXBP5LQ9Y2K9 1186 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 VWA7Q9Y334 891 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 GLTPD2A6NH11 291 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 OR6C75A6NL08 312 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 SNRPB2P08579 225 aaKnown RBP17.71■□□□□ 0.43
PHRF1-205ENST00000533464 OR1D2P34982 312 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 DUSP4Q13115 394 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 RNASEH2BQ5TBB1 312 aaKnown RBP17.71■□□□□ 0.43
PHRF1-205ENST00000533464 ZNF621Q6ZSS3 439 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 ROGDIQ9GZN7 287 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 RHOJQ9H4E5 214 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 PNPOQ9NVS9 261 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 A0A1W2PQH9 124 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 ARHGEF9O43307 516 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 IRF8Q02556 426 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 CHADLQ6NUI6 762 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 TRAPPC5Q8IUR0 188 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 ITFG1Q8TB96 612 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 THG1LQ9NWX6 298 aaKnown RBP17.71■□□□□ 0.43
PHRF1-205ENST00000533464 RABGEF1Q9UJ41 708 aa17.71■□□□□ 0.43
PHRF1-205ENST00000533464 AGO1Q9UL18 857 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms