RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 SUZ12Q15022 739 aaKnown RBP16.93■□□□□ 0.3
PKP3-209ENST00000533069 ALKBH5Q6P6C2 394 aaKnown RBP16.93■□□□□ 0.3
PKP3-209ENST00000533069 LAYNQ6UX15 382 aa16.93■□□□□ 0.3
PKP3-209ENST00000533069 RFX8Q6ZV50 586 aa16.93■□□□□ 0.3
PKP3-209ENST00000533069 CYP4V2Q6ZWL3 525 aaPredicted RBP16.93■□□□□ 0.3
PKP3-209ENST00000533069 RYBPQ8N488 228 aaPredicted RBP16.93■□□□□ 0.3
PKP3-209ENST00000533069 GDAP1L1Q96MZ0 367 aa16.93■□□□□ 0.3
PKP3-209ENST00000533069 OSBPL1AQ9BXW6 950 aa16.93■□□□□ 0.3
PKP3-209ENST00000533069 THAP2Q9H0W7 228 aa16.93■□□□□ 0.3
PKP3-209ENST00000533069 ZDHHC6Q9H6R6 413 aa16.93■□□□□ 0.3
PKP3-209ENST00000533069 LRRC19Q9H756 370 aa16.93■□□□□ 0.3
PKP3-209ENST00000533069 ARHGAP20Q9P2F6 1191 aa16.93■□□□□ 0.3
PKP3-209ENST00000533069 ANGPTL2Q9UKU9 493 aa16.93■□□□□ 0.3
PKP3-209ENST00000533069 ACTL7AQ9Y615 435 aa16.93■□□□□ 0.3
PKP3-209ENST00000533069 GON4LQ3T8J9 2241 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 DOCK4Q8N1I0 1966 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 A0A1W2PR77 199 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 PRAMEF26H0Y7S4 382 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 FLRT2O43155 660 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 DAPK3O43293 454 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 AKR1B10O60218 316 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 SH3BP5O60239 455 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 MAGEC1O60732 1142 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 RNGTTO60942 597 aaKnown RBP16.92■□□□□ 0.3
PKP3-209ENST00000533069 TMCC1O94876 653 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 POP4O95707 220 aaKnown RBP16.92■□□□□ 0.3
PKP3-209ENST00000533069 CYP1A2P05177 515 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 ADRB3P13945 408 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 HCAR3P49019 387 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 SIM1P81133 766 aaPredicted RBP16.92■□□□□ 0.3
PKP3-209ENST00000533069 RAD51Q06609 339 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 OVGP1Q12889 678 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 SLC18A3Q16572 532 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 CA9Q16790 459 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 BOLA3Q53S33 107 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 PPP6R3Q5H9R7 873 aaPredicted RBP16.92■□□□□ 0.3
PKP3-209ENST00000533069 CCDC122Q5T0U0 273 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 DBX2Q6ZNG2 339 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 IQCHQ86VS3 1027 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 ZSCAN30Q86W11 494 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 HORMAD1Q86X24 394 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 NIPA2Q8N8Q9 360 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 MFSD2AQ8NA29 543 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 KCTD15Q96SI1 283 aaPredicted RBP16.92■□□□□ 0.3
PKP3-209ENST00000533069 ZWILCHQ9H900 591 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 GDF3Q9NR23 364 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 IP6K2Q9UHH9 426 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 PCDHB9Q9Y5E1 797 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 CACNA1EQ15878 2313 aa16.92■□□□□ 0.3
PKP3-209ENST00000533069 SPTBN2O15020 2390 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 A0A1W2PQU0 124 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 ARHGAP42A6NI28 874 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 H0Y8X5 98 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 KRIT1O00522 736 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 YKT6O15498 198 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 AP1G1O43747 822 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 PCDHGA12O60330 932 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 LCA5LO95447 670 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 IGSF6O95976 241 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 WNT1P04628 370 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 MAT2AP31153 395 aaKnown RBP16.91■□□□□ 0.3
PKP3-209ENST00000533069 SPA17Q15506 151 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 DPYSL2Q16555 572 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 MYLK3Q32MK0 819 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 INAVAQ3KP66 663 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 KCNT1Q5JUK3 1230 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 FBXL19Q6PCT2 694 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 LEKR1Q6ZMV7 388 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 RAB7BQ96AH8 199 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 NUP85Q9BW27 656 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 KLC2Q9H0B6 622 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 UBA2Q9UBT2 640 aaPredicted RBP16.91■□□□□ 0.3
PKP3-209ENST00000533069 ANAPC7Q9UJX3 599 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 PCOLCE2Q9UKZ9 415 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 NENFQ9UMX5 172 aa16.91■□□□□ 0.3
PKP3-209ENST00000533069 EPN1Q9Y6I3 576 aaPredicted RBP16.91■□□□□ 0.3
PKP3-209ENST00000533069 NUMA1Q14980 2115 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 A0A1B0GTQ1 180 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 SPAARA0A1B0GVQ0 90 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 H3BRJ5 948 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 TLR4O00206 839 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 RNF103O00237 685 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 ZSCAN12O43309 604 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 PCDH8O95206 1070 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 NDUFA10O95299 355 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 TRIM16O95361 564 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 ERCC2P18074 760 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 EIF4A3P38919 411 aaKnown RBP16.9■□□□□ 0.3
PKP3-209ENST00000533069 ARL4AP40617 200 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 NXPH1P58417 271 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 RHOAP61586 193 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 STAT4Q14765 748 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 TRIP6Q15654 476 aaKnown RBP16.9■□□□□ 0.3
PKP3-209ENST00000533069 ASTE1Q2TB18 679 aaPredicted RBP16.9■□□□□ 0.3
PKP3-209ENST00000533069 ZNF805Q5CZA5 627 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 KIAA1161Q6NSJ0 714 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 PARS2Q7L3T8 475 aaKnown RBP16.9■□□□□ 0.3
PKP3-209ENST00000533069 OXR1Q8N573 874 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 LZTR1Q8N653 840 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 OR6K2Q8NGY2 324 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms