RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 IFI35P80217 286 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 CCDC15Q0P6D6 951 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 GRM3Q14832 879 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 CST6Q15828 149 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 ATXN7L2Q5T6C5 722 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 PAPD7Q5XG87 772 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 ADAT2Q7Z6V5 191 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 SRLQ86TD4 932 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 WDR5BQ86VZ2 330 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 CDKL3Q8IVW4 592 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 RASGEF1CQ8N431 466 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 CHST14Q8NCH0 376 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 GANCQ8TET4 914 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 HTR3CQ8WXA8 447 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 EXOC2Q96KP1 924 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 VAT1Q99536 393 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 IL12RB2Q99665 862 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 OSBPL1AQ9BXW6 950 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 CPEB1Q9BZB8 566 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 POLR1EQ9GZS1 481 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 SLC6A17Q9H1V8 727 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 ZDHHC6Q9H6R6 413 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 NT5MQ9NPB1 228 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 ITM2CQ9NQX7 267 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 HOMER3Q9NSC5 361 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 LHX3Q9UBR4 397 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 EVLQ9UI08 416 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 TTC7AQ9ULT0 858 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 NCKAP1Q9Y2A7 1128 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 SAR1BQ9Y6B6 198 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 BCLAF3A2AJT9 711 aaKnown RBP11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 KPNA3O00505 521 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 MUSKO15146 869 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 LEFTY1O75610 366 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 STK10O94804 968 aaKnown RBP11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 ADH1BP00325 375 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 C7P10643 843 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 RBL1P28749 1068 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 CNR2P34972 360 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 MAPK8P45983 427 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 PSMD8P48556 350 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 MAXP61244 160 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 AP1S1P61966 158 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 DMWDQ09019 674 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 CCNG2Q16589 344 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 TTC31Q49AM3 519 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 TEX44Q53QW1 395 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 RALGPS1Q5JS13 557 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 SYT10Q6XYQ8 523 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 CACUL1Q86Y37 369 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 PGBD5Q8N414 524 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 HDDC3Q8N4P3 179 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 OR6K2Q8NGY2 324 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 PIP4K2CQ8TBX8 421 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 ACTRT1Q8TDG2 376 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 COG1Q8WTW3 980 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 PPP1R16AQ96I34 528 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 MS4A14Q96JA4 679 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 AGAP3Q96P47 875 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 QKIQ96PU8 341 aaKnown RBP eCLIP11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 NUDCD1Q96RS6 583 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 TUBGCP5Q96RT8 1024 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 OMDQ99983 421 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 FAM118BQ9BPY3 351 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 MGME1Q9BQP7 344 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 TPSD1Q9BZJ3 242 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 IRF2BPLQ9H1B7 796 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 KCNH6Q9H252 994 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 PABPC3Q9H361 631 aaKnown RBP11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 SCUBE2Q9NQ36 999 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 DYRK4Q9NR20 520 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 ZSCAN32Q9NX65 697 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 FBXL12Q9NXK8 326 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 SARDHQ9UL12 918 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 R3HDM2Q9Y2K5 976 aaKnown RBP11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 TTLL3Q9Y4R7 772 aa11.39□□□□□ -0.59
TRAPPC4-211ENST00000533012 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 H0Y858 1186 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 MID1O15344 667 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 INSIG1O15503 277 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 KCNN4O15554 427 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 CTSLP07711 333 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 CR2P20023 1033 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 PTPN3P26045 913 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 OXTRP30559 389 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 STIP1P31948 543 aaKnown RBP11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 GKP32189 559 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 RGRP47804 291 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 TPMTP51580 245 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 BCL2L1Q07817 233 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 NCEH1Q6PIU2 408 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 GDPD4Q6W3E5 623 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 NYAP1Q6ZVC0 841 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 PID1Q7Z2X4 250 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 KBTBD6Q86V97 674 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 CNTD1Q8N815 330 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 SLC35B2Q8TB61 432 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 GRIN3AQ8TCU5 1115 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 C1orf54Q8WWF1 131 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 NELL1Q92832 810 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms