RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 NOMO3P69849 1222 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 ALDH6A1Q02252 535 aaKnown RBP11.42□□□□□ -0.58
PTPRK-221ENST00000532331 RASA2Q15283 850 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 PCID2Q5JVF3 399 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 SCARA3Q6AZY7 606 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 SLC39A5Q6ZMH5 540 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 ANKS1BQ7Z6G8 1248 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 OR6K2Q8NGY2 324 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 VMP1Q96GC9 406 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 FUBP3Q96I24 572 aaKnown RBP eCLIP11.42□□□□□ -0.582e-6■■□□□ 13.2
PTPRK-221ENST00000532331 SPATA13Q96N96 652 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 FERD3LQ96RJ6 166 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 ST6GALNAC4Q9H4F1 302 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 BATF3Q9NR55 127 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 PHRF1Q9P1Y6 1649 aaKnown RBP11.42□□□□□ -0.58
PTPRK-221ENST00000532331 INPPL1O15357 1258 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 ATG13O75143 517 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 PSMB4P28070 264 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 CLK1P49759 484 aaKnown RBP11.41□□□□□ -0.58
PTPRK-221ENST00000532331 SNAP47Q5SQN1 464 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 CYP20A1Q6UW02 462 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 PHYKPLQ8IUZ5 450 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 C4orf32Q8N8J7 132 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 PHF21BQ96EK2 531 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 MAGED4Q96JG8 741 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 ZNF670Q9BS34 389 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 FAM126AQ9BYI3 521 aaPredicted RBP11.41□□□□□ -0.58
PTPRK-221ENST00000532331 DUOX1Q9NRD9 1551 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 ANKDD1BA6NHY2 528 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 LRRC10BA6NIK2 292 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 SNTNA6NMZ2 147 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 INPP4BO15327 924 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 BAIAP3O94812 1187 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 SERPINE1P05121 402 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 SLC2A4P14672 509 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 DDX6P26196 483 aaKnown RBP eCLIP11.41□□□□□ -0.581e-7■■■■■ 60
PTPRK-221ENST00000532331 SKIV2L2P42285 1042 aaKnown RBP11.41□□□□□ -0.58
PTPRK-221ENST00000532331 SP2Q02086 613 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 PARP15Q460N3 678 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 RERGQ96A58 199 aaPredicted RBP11.41□□□□□ -0.58
PTPRK-221ENST00000532331 IL22Q9GZX6 179 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 FAM124BQ9H5Z6 455 aaPredicted RBP11.41□□□□□ -0.58
PTPRK-221ENST00000532331 FAM237AA0A1B0GTK4 181 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 BTN3A1O00481 513 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 ZNF23P17027 643 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 NFKB1P19838 968 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 CXCR2P25025 360 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 PIK3CGP48736 1102 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 TRPC1P48995 793 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 DPYSL3Q14195 570 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 TMEM154Q6P9G4 183 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 RFWD3Q6PCD5 774 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 TTC33Q6PID6 262 aaPredicted RBP11.41□□□□□ -0.58
PTPRK-221ENST00000532331 BEND7Q8N7W2 519 aaPredicted RBP11.41□□□□□ -0.58
PTPRK-221ENST00000532331 OR10G6Q8NH81 332 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 B3GALT6Q96L58 329 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 HNRNPABQ99729 332 aaKnown RBP11.41□□□□□ -0.58
PTPRK-221ENST00000532331 RHBGQ9H310 441 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 PARVBQ9HBI1 364 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 DZANK1Q9NVP4 752 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 VTI1BQ9UEU0 232 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 A0A1W2PQ67 120 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 M0R3G1 203 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 GUCY1B2O75343 617 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 RPA3P35244 121 aaPredicted RBP11.41□□□□□ -0.58
PTPRK-221ENST00000532331 MTHFRP42898 656 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 SLC1A6P48664 564 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 SLC16A1P53985 500 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 MMRN1Q13201 1228 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 LRRC32Q14392 662 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 LRRC38Q5VT99 294 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 MTDHQ86UE4 582 aaKnown RBP11.41□□□□□ -0.58
PTPRK-221ENST00000532331 C11orf74Q86VG3 221 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 APOPT1Q96IL0 206 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 RNF157Q96PX1 679 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 NINJ2Q9NZG7 142 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 A0A096LPK6 155 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 ISM1B1AKI9 464 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 TRIM13O60858 407 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 KATNA1O75449 491 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 C4BPAP04003 597 aaKnown RBP11.41□□□□□ -0.58
PTPRK-221ENST00000532331 CYP1A1P04798 512 aaPredicted RBP11.41□□□□□ -0.58
PTPRK-221ENST00000532331 CYP1A2P05177 515 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 UGT2B4P06133 528 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 NQO1P15559 274 aaKnown RBP11.41□□□□□ -0.58
PTPRK-221ENST00000532331 TTPAP49638 278 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 IL2P60568 153 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 MAXP61244 160 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 STRADAQ7RTN6 431 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 TMC3Q7Z5M5 1100 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 DNAJB7Q7Z6W7 309 aaPredicted RBP11.41□□□□□ -0.58
PTPRK-221ENST00000532331 CYP4X1Q8N118 509 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 ATL1Q8WXF7 558 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 LRRC39Q96DD0 335 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 DNAJC1Q96KC8 554 aaKnown RBP11.41□□□□□ -0.58
PTPRK-221ENST00000532331 FAM84AQ96KN4 292 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 ANKZF1Q9H8Y5 726 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 YIPF1Q9Y548 306 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 DOT1LQ8TEK3 1739 aa11.41□□□□□ -0.58
PTPRK-221ENST00000532331 H3BM21 787 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms