RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 ANTXRLA6NF34 631 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 KCNU1A8MYU2 1149 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 F5H5T6 163 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 H3BRJ5 948 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 DLX3O60479 287 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 TBL1XO60907 577 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 KLF8O95600 359 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 CRTAMO95727 393 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 CALB1P05937 261 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 KRT3P12035 628 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 TDGF1P13385 188 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 RRM1P23921 792 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 HOXD9P28356 352 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 HOXA6P31267 233 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 SDC4P31431 198 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 SLC6A4P31645 630 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 RDXP35241 583 aaKnown RBP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 NBL1P41271 181 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 PRKCIP41743 596 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 KIR2DL1P43626 348 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 RXRGP48443 463 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 FNTBP49356 437 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 SULT1E1P49888 294 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 DGKEP52429 567 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 ZBED6P86452 979 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 DEUP1Q05D60 604 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 KLHL30Q0D2K2 578 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 EIF4EBP2Q13542 120 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 DMC1Q14565 340 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 GEN1Q17RS7 908 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 SLC25A52Q3SY17 297 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 HSF5Q4G112 596 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 MS4A13Q5J8X5 152 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 WDR45BQ5MNZ6 344 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 EOGTQ5NDL2 527 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 MPP7Q5T2T1 576 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 INTS11Q5TA45 600 aaKnown RBP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 EMC10Q5UCC4 262 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 E4F1Q66K89 784 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 SPECC1LQ69YQ0 1117 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 NADSYN1Q6IA69 706 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 ACAD10Q6JQN1 1059 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 PPP1R2P3Q6NXS1 205 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 TLDC1Q6P9B6 456 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 LRFN4Q6PJG9 635 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 IGF2-ASQ6U949 168 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 ARCQ7LC44 396 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 TRMT11Q7Z4G4 463 aaKnown RBP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 TRIM46Q7Z4K8 759 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 ANKS1BQ7Z6G8 1248 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 RAB44Q7Z6P3 723 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 PHLDB2Q86SQ0 1253 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 CHSY1Q86X52 802 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 CCDC117Q8IWD4 279 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 PHACTR4Q8IZ21 702 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 CFAP52Q8N1V2 620 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 NXPE1Q8N323 547 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 CAMKK1Q8N5S9 505 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 ALLCQ8N6M5 410 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 EMC1Q8N766 993 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 ZNF513Q8N8E2 541 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 ZNF557Q8N988 423 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 TXNDC5Q8NBS9 432 aaKnown RBP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 HJURPQ8NCD3 748 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 TSTD1Q8NFU3 115 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 NELL1Q92832 810 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 NKD2Q969F2 451 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 NT5C3BQ969T7 300 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 P2RY11Q96G91 374 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 RCC1LQ96I51 464 aaKnown RBP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 CFAP57Q96MR6 1250 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 SERINC2Q96SA4 455 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 TBCBQ99426 244 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 NPY6RQ99463 290 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 SLC30A3Q99726 388 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 HAUS4Q9H6D7 363 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 WDCPQ9H6R7 721 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 ZDHHC4Q9NPG8 344 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 PIGVQ9NUD9 493 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 POLR3BQ9NW08 1133 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 C14orf119Q9NWQ9 140 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 CALCOCO1Q9P1Z2 691 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 XPO7Q9UIA9 1087 aaKnown RBP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 TMEM59LQ9UK28 342 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 FBXO10Q9UK96 956 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 CLEC4EQ9ULY5 219 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 MMP17Q9ULZ9 603 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 CAPN11Q9UMQ6 739 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 SLC27A6Q9Y2P4 619 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 STARD13Q9Y3M8 1113 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 PAXBP1Q9Y5B6 917 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 MYO16Q9Y6X6 1858 aa5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 HELZP42694 1942 aaKnown RBP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 ZNF638Q14966 1978 aaKnown RBP5.95□□□□□ -1.46
HMGB1P42-201ENST00000532126 TRIOO75962 3097 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 ZNF318Q5VUA4 2279 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 TMCO5BA8MYB1 307 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 RASA4BC9J798 803 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 PROB1E7EW31 1015 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms