RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 PDZD7Q9H5P4 517 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 CDCP1Q9H5V8 836 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 ANO10Q9NW15 660 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 MKLN1Q9UL63 735 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 RABL2BQ9UNT1 228 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 NR2E1Q9Y466 385 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 CLDN16Q9Y5I7 305 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 ATAD2BQ9ULI0 1458 aa4.49□□□□□ -1.69
AC055878.1-201ENST00000531858 UTYO14607 1347 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 LOC102723996A0A087X1L8 192 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 A0A1W2PRX2 142 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 HTR3EA5X5Y0 456 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 TMEM247A6NEH6 219 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 OOEPA6NGQ2 149 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 FAM90A8PA6NJQ4 464 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 ANXA2P2A6NMY6 339 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 DIRC3C9JPN6 131 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 MPHOSPH10O00566 681 aaKnown RBP4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 TRIM24O15164 1050 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 CEP104O60308 925 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 TACC1O75410 805 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 PRSS23O95084 383 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 GLI1P08151 1106 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 FAM90A13PP0C7W8 464 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 FAM90A24PP0C7X0 464 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 ZNF888P0CJ79 500 aaPredicted RBP4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 TYMPP19971 482 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 PRPH2P23942 346 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 DUSP1P28562 367 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 ADORA2AP29274 412 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 MTHFRP42898 656 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 KHKP50053 298 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 CHN2P52757 468 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 YWHAZP63104 245 aaKnown RBP4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 SRSF3P84103 164 aaKnown RBP4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 TAP1Q03518 808 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 CEBPZQ03701 1054 aaKnown RBP4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 IKQ13123 557 aaPredicted RBP4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 ZNF273Q14593 569 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 IL11RAQ14626 422 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 ZNF124Q15973 351 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 HIST2H2ACQ16777 129 aaPredicted RBP4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 ANKDD1AQ495B1 522 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 TMEM63BQ5T3F8 832 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 TXNDC8Q6A555 127 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 SLC9A4Q6AI14 798 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 GRHL2Q6ISB3 625 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 FOXR2Q6PJQ5 311 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 TSSK4Q6SA08 328 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 RABEPKQ7Z6M1 372 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 ZNF605Q86T29 641 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 DTX2Q86UW9 622 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 ARHGEF25Q86VW2 580 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 XYLT1Q86Y38 959 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 P3H2Q8IVL5 708 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 WDR63Q8IWG1 891 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 TP53INP2Q8IXH6 220 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 RNF168Q8IYW5 571 aaPredicted RBP4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 MMP21Q8N119 569 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 GUF1Q8N442 669 aaKnown RBP4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 PNPLA1Q8N8W4 532 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 ZBTB8BQ8NAP8 495 aaPredicted RBP4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 DENND6BQ8NEG7 585 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 SHCBP1Q8NEM2 672 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 OR52N2Q8NGI0 321 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 PTPMT1Q8WUK0 201 aaPredicted RBP4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 SOCS4Q8WXH5 440 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 ATG4AQ8WYN0 398 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 SNX19Q92543 992 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 FAM136AQ96C01 138 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 TRIM44Q96DX7 344 aaPredicted RBP4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 OR2A14Q96R47 310 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 CPPED1Q9BRF8 314 aaPredicted RBP4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 C17orf75Q9HAS0 396 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 PAK6Q9NQU5 681 aaPredicted RBP4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 MBNL3Q9NUK0 354 aaKnown RBP4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 TAS2R3Q9NYW6 316 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 ACTR3BQ9P1U1 418 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 ABI3Q9P2A4 366 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 FBXO40Q9UH90 709 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 RRP15Q9Y3B9 282 aaKnown RBP4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 KIF3AQ9Y496 699 aa4.48□□□□□ -1.69
AC055878.1-201ENST00000531858 GPR75-ASB3A0A0A6YYF3 556 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 MYADML2A6NDP7 307 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 F5H697 171 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 PRICKLE3O43900 615 aaPredicted RBP4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 TMPRSS11DO60235 418 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 SOCS5O75159 536 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 DAB1O75553 588 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 HLA-DQA2P01906 255 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 HEXAP06865 529 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 PKMP14618 531 aaKnown RBP4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 TFEBP19484 476 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 FGFR4P22455 802 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 YY1P25490 414 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 POU1F1P28069 291 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 GNAQP50148 359 aa4.47□□□□□ -1.69
AC055878.1-201ENST00000531858 TKTL1P51854 596 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms