RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 PTPRN2Q92932 1015 aa17.9■□□□□ 0.46
CTSB-222ENST00000531551 ISG20Q96AZ6 181 aaKnown RBP17.9■□□□□ 0.46
CTSB-222ENST00000531551 GDAP1L1Q96MZ0 367 aa17.9■□□□□ 0.46
CTSB-222ENST00000531551 TRIM51Q9BSJ1 452 aa17.9■□□□□ 0.46
CTSB-222ENST00000531551 PCDH9Q9HC56 1237 aa17.9■□□□□ 0.46
CTSB-222ENST00000531551 PAK5Q9P286 719 aa17.9■□□□□ 0.46
CTSB-222ENST00000531551 SUN2Q9UH99 717 aa17.9■□□□□ 0.46
CTSB-222ENST00000531551 ASIC3Q9UHC3 531 aa17.9■□□□□ 0.46
CTSB-222ENST00000531551 EVLQ9UI08 416 aaPredicted RBP17.9■□□□□ 0.46
CTSB-222ENST00000531551 CHD5Q8TDI0 1954 aa17.9■□□□□ 0.46
CTSB-222ENST00000531551 EDDM13A0A1B0GTR0 161 aa17.9■□□□□ 0.46
CTSB-222ENST00000531551 NPC1O15118 1278 aa17.9■□□□□ 0.46
CTSB-222ENST00000531551 SYNCRIPO60506 623 aaKnown RBP17.9■□□□□ 0.46
CTSB-222ENST00000531551 SIN3BO75182 1162 aa17.9■□□□□ 0.46
CTSB-222ENST00000531551 PSMB4P28070 264 aa17.9■□□□□ 0.46
CTSB-222ENST00000531551 GKP32189 559 aa17.9■□□□□ 0.46
CTSB-222ENST00000531551 HSPA9P38646 679 aaKnown RBP17.9■□□□□ 0.46
CTSB-222ENST00000531551 VASPP50552 380 aaPredicted RBP17.9■□□□□ 0.46
CTSB-222ENST00000531551 GPS1Q13098 491 aa17.9■□□□□ 0.46
CTSB-222ENST00000531551 DPY19L3Q6ZPD9 716 aa17.9■□□□□ 0.46
CTSB-222ENST00000531551 MMGT1Q8N4V1 131 aa17.9■□□□□ 0.46
CTSB-222ENST00000531551 HINFPQ9BQA5 517 aa17.9■□□□□ 0.46
CTSB-222ENST00000531551 LRRC1Q9BTT6 524 aa17.9■□□□□ 0.46
CTSB-222ENST00000531551 TRIM31Q9BZY9 425 aa17.9■□□□□ 0.46
CTSB-222ENST00000531551 UBP1Q9NZI7 540 aa17.9■□□□□ 0.46
CTSB-222ENST00000531551 SHROOM3Q8TF72 1996 aa17.89■□□□□ 0.45
CTSB-222ENST00000531551 INSIG1O15503 277 aa17.89■□□□□ 0.45
CTSB-222ENST00000531551 SLU7O95391 586 aaKnown RBP17.89■□□□□ 0.45
CTSB-222ENST00000531551 METTL18O95568 372 aa17.89■□□□□ 0.45
CTSB-222ENST00000531551 HOXB2P14652 356 aa17.89■□□□□ 0.45
CTSB-222ENST00000531551 CD86P42081 329 aa17.89■□□□□ 0.45
CTSB-222ENST00000531551 CCNHP51946 323 aaPredicted RBP17.89■□□□□ 0.45
CTSB-222ENST00000531551 NSUN2Q08J23 767 aaKnown RBP eCLIP17.89■□□□□ 0.45
CTSB-222ENST00000531551 NIPAL4Q0D2K0 466 aa17.89■□□□□ 0.45
CTSB-222ENST00000531551 SYCP2LQ5T4T6 812 aa17.89■□□□□ 0.45
CTSB-222ENST00000531551 ZNF687Q8N1G0 1237 aa17.89■□□□□ 0.45
CTSB-222ENST00000531551 OR2A12Q8NGT7 310 aa17.89■□□□□ 0.45
CTSB-222ENST00000531551 SPATA22Q8NHS9 363 aa17.89■□□□□ 0.45
CTSB-222ENST00000531551 SLCO2A1Q92959 643 aa17.89■□□□□ 0.45
CTSB-222ENST00000531551 RBM15Q96T37 977 aaKnown RBP eCLIP17.89■□□□□ 0.459e-7■■■■□ 22.2
CTSB-222ENST00000531551 GBA3Q9H227 469 aa17.89■□□□□ 0.45
CTSB-222ENST00000531551 ZDHHC6Q9H6R6 413 aa17.89■□□□□ 0.45
CTSB-222ENST00000531551 NOD2Q9HC29 1040 aa17.89■□□□□ 0.45
CTSB-222ENST00000531551 RAB6BQ9NRW1 208 aa17.89■□□□□ 0.45
CTSB-222ENST00000531551 FARP1Q9Y4F1 1045 aaPredicted RBP17.89■□□□□ 0.45
CTSB-222ENST00000531551 RIOK3O14730 519 aaKnown RBP17.88■□□□□ 0.45
CTSB-222ENST00000531551 GSRP00390 522 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 PDGFBP01127 241 aaPredicted RBP17.88■□□□□ 0.45
CTSB-222ENST00000531551 ALADP13716 330 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 ADCY8P40145 1251 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 BASP1P80723 227 aaKnown RBP17.88■□□□□ 0.45
CTSB-222ENST00000531551 SLC7A5Q01650 507 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 PRPSAP1Q14558 356 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 STARD3Q14849 445 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 PKN3Q6P5Z2 889 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 TRIM67Q6ZTA4 783 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 SRLQ86TD4 932 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 STK40Q8N2I9 435 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 CHST14Q8NCH0 376 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 PJA1Q8NG27 643 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 GRIN3AQ8TCU5 1115 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 NUDCD1Q96RS6 583 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 SLC25A51Q9H1U9 297 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 POLR3BQ9NW08 1133 aaPredicted RBP17.88■□□□□ 0.45
CTSB-222ENST00000531551 SIT1Q9Y3P8 196 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 E7EVH7 732 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 ADAM23O75077 832 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 MT-CYBP00156 380 aaPredicted RBP17.88■□□□□ 0.45
CTSB-222ENST00000531551 DCNP07585 359 aaKnown RBP17.88■□□□□ 0.45
CTSB-222ENST00000531551 PTK6Q13882 451 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 PARP6Q2NL67 630 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 MYLK3Q32MK0 819 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 EOGTQ5NDL2 527 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 TEX35Q5T0J7 233 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 C9orf64Q5T6V5 341 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 SYDE1Q6ZW31 735 aaPredicted RBP17.88■□□□□ 0.45
CTSB-222ENST00000531551 SYNPOQ8N3V7 929 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 PAF1Q8N7H5 531 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 ARRDC2Q8TBH0 407 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 ETNK1Q9HBU6 452 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 PRSS16Q9NQE7 514 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 NEU2Q9Y3R4 380 aa17.88■□□□□ 0.45
CTSB-222ENST00000531551 TARSL2A2RTX5 802 aaKnown RBP17.87■□□□□ 0.45
CTSB-222ENST00000531551 FAM187AA6NFU0 413 aa17.87■□□□□ 0.45
CTSB-222ENST00000531551 CHRM1P11229 460 aaPredicted RBP17.87■□□□□ 0.45
CTSB-222ENST00000531551 CR2P20023 1033 aa17.87■□□□□ 0.45
CTSB-222ENST00000531551 LMAN1P49257 510 aa17.87■□□□□ 0.45
CTSB-222ENST00000531551 RAD51Q06609 339 aa17.87■□□□□ 0.45
CTSB-222ENST00000531551 FZD5Q13467 585 aa17.87■□□□□ 0.45
CTSB-222ENST00000531551 ENPP2Q13822 863 aa17.87■□□□□ 0.45
CTSB-222ENST00000531551 PCSK7Q16549 785 aa17.87■□□□□ 0.45
CTSB-222ENST00000531551 CCDC70Q6NSX1 233 aa17.87■□□□□ 0.45
CTSB-222ENST00000531551 KDELC2Q7Z4H8 507 aa17.87■□□□□ 0.45
CTSB-222ENST00000531551 CACUL1Q86Y37 369 aa17.87■□□□□ 0.45
CTSB-222ENST00000531551 CCHCR1Q8TD31 782 aa17.87■□□□□ 0.45
CTSB-222ENST00000531551 FCRL5Q96RD9 977 aa17.87■□□□□ 0.45
CTSB-222ENST00000531551 GABRG3Q99928 467 aa17.87■□□□□ 0.45
CTSB-222ENST00000531551 HEPHQ9BQS7 1158 aa17.87■□□□□ 0.45
CTSB-222ENST00000531551 UTP11Q9Y3A2 253 aaKnown RBP17.87■□□□□ 0.45
CTSB-222ENST00000531551 EFCAB8A8MWE9 144 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms