RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 AADATQ8N5Z0 425 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 TSEN2Q8NCE0 465 aaKnown RBP14.68□□□□□ -0.06
CPSF1-206ENST00000531480 PIP4K2CQ8TBX8 421 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 SPOCK2Q92563 424 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 P3H4Q92791 437 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 ERLEC1Q96DZ1 483 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 LGMNQ99538 433 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 IL12RB2Q99665 862 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 HEMGNQ9BXL5 484 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 TM6SF2Q9BZW4 377 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 SEMA4AQ9H3S1 761 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 CD93Q9NPY3 652 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 TRMT1Q9NXH9 659 aaKnown RBP14.68□□□□□ -0.06
CPSF1-206ENST00000531480 SAE1Q9UBE0 346 aaPredicted RBP14.68□□□□□ -0.06
CPSF1-206ENST00000531480 HECAQ9UBI9 543 aaPredicted RBP14.68□□□□□ -0.06
CPSF1-206ENST00000531480 IL36AQ9UHA7 158 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 MBD1Q9UIS9 605 aaPredicted RBP14.68□□□□□ -0.06
CPSF1-206ENST00000531480 FZD4Q9ULV1 537 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 FRYLO94915 3013 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 NUMA1Q14980 2115 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 HACD1B0YJ81 288 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 C1QTNF3-AMACRE9PGA6 284 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 PPP1R12AO14974 1030 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-206ENST00000531480 MID1O15344 667 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 LEFTY1O75610 366 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 RPP40O75818 363 aaKnown RBP14.67□□□□□ -0.06
CPSF1-206ENST00000531480 IGSF6O95976 241 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 DNTTP04053 509 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 CCNB1P14635 433 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 OXTRP30559 389 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 SLC8A1P32418 973 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 METAP1P53582 386 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 DYNLT1P63172 113 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 ZNF211Q13398 564 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-206ENST00000531480 GRM3Q14832 879 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 LLGL1Q15334 1064 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 TTC31Q49AM3 519 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-206ENST00000531480 SPDYCQ5MJ68 293 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 DNTTIP2Q5QJE6 756 aaKnown RBP14.67□□□□□ -0.06
CPSF1-206ENST00000531480 ATXN7L2Q5T6C5 722 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-206ENST00000531480 FAM46CQ5VWP2 391 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 KIAA1324Q6UXG2 1013 aaKnown RBP14.67□□□□□ -0.06
CPSF1-206ENST00000531480 PGBD3Q8N328 593 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 HCAR2Q8TDS4 363 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 TUBGCP5Q96RT8 1024 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 CINPQ9BW66 212 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-206ENST00000531480 OSBPL1AQ9BXW6 950 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 WSB2Q9NYS7 404 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-206ENST00000531480 SERGEFQ9UGK8 458 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 ATP8A1Q9Y2Q0 1164 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 THADAQ6YHU6 1953 aa14.67□□□□□ -0.06
CPSF1-206ENST00000531480 PRR23AA6NEV1 266 aa14.66□□□□□ -0.06
CPSF1-206ENST00000531480 SLC7A4O43246 635 aa14.66□□□□□ -0.06
CPSF1-206ENST00000531480 IL1BP01584 269 aa14.66□□□□□ -0.06
CPSF1-206ENST00000531480 ACADMP11310 421 aa14.66□□□□□ -0.06
CPSF1-206ENST00000531480 ITGB7P26010 798 aa14.66□□□□□ -0.06
CPSF1-206ENST00000531480 MMP13P45452 471 aa14.66□□□□□ -0.06
CPSF1-206ENST00000531480 MAPK8P45983 427 aa14.66□□□□□ -0.06
CPSF1-206ENST00000531480 AP1S1P61966 158 aa14.66□□□□□ -0.06
CPSF1-206ENST00000531480 SFSWAPQ12872 951 aaKnown RBP14.66□□□□□ -0.06
CPSF1-206ENST00000531480 ARSIQ5FYB1 569 aa14.66□□□□□ -0.06
CPSF1-206ENST00000531480 SLC35F6Q8N357 371 aa14.66□□□□□ -0.06
CPSF1-206ENST00000531480 FRMD1Q8N878 549 aa14.66□□□□□ -0.06
CPSF1-206ENST00000531480 ACTL9Q8TC94 416 aa14.66□□□□□ -0.06
CPSF1-206ENST00000531480 NSMCE1Q8WV22 266 aa14.66□□□□□ -0.06
CPSF1-206ENST00000531480 RLN3Q8WXF3 142 aa14.66□□□□□ -0.06
CPSF1-206ENST00000531480 NSMCE3Q96MG7 304 aa14.66□□□□□ -0.06
CPSF1-206ENST00000531480 QKIQ96PU8 341 aaKnown RBP eCLIP14.66□□□□□ -0.06
CPSF1-206ENST00000531480 NUDCD1Q96RS6 583 aa14.66□□□□□ -0.06
CPSF1-206ENST00000531480 HDAC8Q9BY41 377 aa14.66□□□□□ -0.06
CPSF1-206ENST00000531480 PCED1AQ9H1Q7 454 aa14.66□□□□□ -0.06
CPSF1-206ENST00000531480 DKK3Q9UBP4 350 aa14.66□□□□□ -0.06
CPSF1-206ENST00000531480 R4GN57 208 aa14.66□□□□□ -0.06
CPSF1-206ENST00000531480 WDR87Q6ZQQ6 2873 aa14.66□□□□□ -0.06
CPSF1-206ENST00000531480 TSPAN11A1L157 253 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 MTSS1O43312 755 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 BCKDHBP21953 392 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 CES1P23141 567 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 CD6P30203 668 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 PSMD8P48556 350 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 DNA2P51530 1060 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 OTUD4Q01804 1114 aaKnown RBP14.65□□□□□ -0.06
CPSF1-206ENST00000531480 RAD51Q06609 339 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 ZBTB17Q13105 803 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 SRSF5Q13243 272 aaKnown RBP14.65□□□□□ -0.06
CPSF1-206ENST00000531480 ZNF235Q14590 738 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 PLK5Q496M5 336 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 SLC45A4Q5BKX6 768 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 ZNF805Q5CZA5 627 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 ZNF569Q5MCW4 686 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 PIP5KL1Q5T9C9 394 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 AGBL4Q5VU57 503 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 PMS2CLQ68D20 193 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 NCEH1Q6PIU2 408 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 SLC36A4Q6YBV0 504 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 SRLQ86TD4 932 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 SLC13A5Q86YT5 568 aaPredicted RBP14.65□□□□□ -0.06
CPSF1-206ENST00000531480 BBS5Q8N3I7 341 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 FAM160A2Q8N612 972 aaPredicted RBP14.65□□□□□ -0.06
CPSF1-206ENST00000531480 CNTD1Q8N815 330 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms