RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 ZNF638Q14966 1978 aaKnown RBP9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 TCRBV5S1A1TA0A578 114 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 FAM170AA1A519 330 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 C2orf78A6NCI8 922 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 YJEFN3A6XGL0 299 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 LOC730098B7Z3J9 87 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 E7ENQ6 273 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 FBXO21O94952 628 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 PRAMEF12O95522 483 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 SLPIP03973 132 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 FYNP06241 537 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 LCP1P13796 627 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 SP100P23497 879 aaPredicted RBP9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 ACADSBP45954 432 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 TUBP50607 506 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 GSCP56915 257 aaPredicted RBP9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 CDK17Q00537 523 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 TAF12Q16514 161 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 HS1BP3Q53T59 392 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 TXNDC8Q6A555 127 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 OLFML1Q6UWY5 402 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 FAM183BPQ6ZVS7 135 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 MON1BQ7L1V2 547 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 MON1AQ86VX9 555 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 ZNF227Q86WZ6 799 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 PHF13Q86YI8 300 aaPredicted RBP9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 TRIM48Q8IWZ4 208 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 PALM2Q8IXS6 379 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 SIX6OS1Q8N1H7 587 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 IRGQQ8WZA9 623 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 ANAPC16Q96DE5 110 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 RSPRY1Q96DX4 576 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 PPP1R13BQ96KQ4 1090 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 SLITRK1Q96PX8 696 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 SLC22A12Q96S37 553 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 CHP1Q99653 195 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 SLC46A2Q9BY10 475 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 SMOC1Q9H4F8 434 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 CLIC5Q9NZA1 410 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 GDE1Q9NZC3 331 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 TRPM5Q9NZQ8 1165 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 TMEFF2Q9UIK5 374 aaPredicted RBP9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 TESMINQ9Y4I5 508 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 CEP83Q9Y592 693 aa9.12□□□□□ -0.95
CCDC90B-217ENST00000530253 DENND4CQ5VZ89 1909 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 ANAPC1Q9H1A4 1944 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 NUP210Q8TEM1 1887 aaPredicted RBP9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 KIF26AQ9ULI4 1882 aaPredicted RBP9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 A0A087X0T9 212 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 ANHXE9PGG2 379 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 KRIT1O00522 736 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 COCHO43405 550 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 TPM1P09493 284 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 FAM228BP0C875 321 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 LAMP2P13473 410 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 DDX6P26196 483 aaKnown RBP eCLIP9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 PPP3CCP48454 512 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 MRE11P49959 708 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 YWHAGP61981 247 aaKnown RBP eCLIP9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 ZXDBP98169 803 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 TAF5Q15542 800 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 C2CD6Q53TS8 623 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 TDRD12Q587J7 1177 aaKnown RBP9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 GPR158Q5T848 1215 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 ACAD10Q6JQN1 1059 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 TRNP1Q6NT89 227 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 MMS22LQ6ZRQ5 1243 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 BEND5Q7L4P6 421 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 SLC26A9Q7LBE3 791 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 OTOP3Q7RTS5 596 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 XYLT1Q86Y38 959 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 DNAAF5Q86Y56 855 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 TMEM139Q8IV31 216 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 ADHFE1Q8IWW8 467 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 ZNF276Q8N554 614 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 TDRD5Q8NAT2 981 aaKnown RBP9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 MRPS31Q92665 395 aaKnown RBP9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 MCRS1Q96EZ8 462 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 GCNAQ96QF7 691 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 PANX2Q96RD6 677 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 C11orf70Q9BRQ4 267 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 MIS12Q9H081 205 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 PDCL3Q9H2J4 239 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 TASP1Q9H6P5 420 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 CCSER2Q9H7U1 834 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 TRPV4Q9HBA0 871 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 TLR8Q9NR97 1041 aaKnown RBP9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 ST7Q9NRC1 585 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 ASNSD1Q9NWL6 643 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 PRKAG3Q9UGI9 489 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 CHORDC1Q9UHD1 332 aaPredicted RBP9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 FAM50BQ9Y247 325 aa9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 BZW2Q9Y6E2 419 aaKnown RBP9.11□□□□□ -0.95
CCDC90B-217ENST00000530253 OVOL3O00110 214 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 ZNF263O14978 683 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 TLR5O60602 858 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 TBX18O95935 607 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 LTFP02788 710 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 ITGAVP06756 1048 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms