RNA–Protein interactions for RNA: ENST00000529372.5

PSMD13-209, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 612 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-209	ENST00000529372	DAOA	P59103	153 aa		11.96	□□□□□ -0.49
PSMD13-209	ENST00000529372	ZNF394	Q53GI3	561 aa		11.96	□□□□□ -0.49
PSMD13-209	ENST00000529372	FAXC	Q5TGI0	409 aa		11.96	□□□□□ -0.49
PSMD13-209	ENST00000529372	OGFOD3	Q6PK18	319 aa		11.96	□□□□□ -0.49
PSMD13-209	ENST00000529372	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.96	□□□□□ -0.49
PSMD13-209	ENST00000529372	LGI2	Q8N0V4	545 aa		11.96	□□□□□ -0.49
PSMD13-209	ENST00000529372	SCML4	Q8N228	414 aa		11.96	□□□□□ -0.49
PSMD13-209	ENST00000529372		Q8NA96	180 aa		11.96	□□□□□ -0.49
PSMD13-209	ENST00000529372	TTC13	Q8NBP0	860 aa		11.96	□□□□□ -0.49
PSMD13-209	ENST00000529372	SLC4A11	Q8NBS3	891 aa		11.96	□□□□□ -0.49
PSMD13-209	ENST00000529372	DENND6B	Q8NEG7	585 aa		11.96	□□□□□ -0.49
PSMD13-209	ENST00000529372	ASB12	Q8WXK4	309 aa		11.96	□□□□□ -0.49
PSMD13-209	ENST00000529372	DDX50	Q9BQ39	737 aa	Known RBP	11.96	□□□□□ -0.49
PSMD13-209	ENST00000529372	NUDT22	Q9BRQ3	303 aa		11.96	□□□□□ -0.49
PSMD13-209	ENST00000529372	EDEM3	Q9BZQ6	932 aa		11.96	□□□□□ -0.49
PSMD13-209	ENST00000529372	HS3ST2	Q9Y278	367 aa		11.96	□□□□□ -0.49
PSMD13-209	ENST00000529372	SLC5A6	Q9Y289	635 aa		11.96	□□□□□ -0.49
PSMD13-209	ENST00000529372	MRPS18B	Q9Y676	258 aa	Known RBP	11.96	□□□□□ -0.49
PSMD13-209	ENST00000529372		K7ERQ8	282 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	XPO1	O14980	1071 aa	Known RBP	11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	AP1G1	O43747	822 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	CPNE6	O95741	557 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	HLA-DRA	P01903	254 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	FYN	P06241	537 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	ADRB3	P13945	408 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	TRIM21	P19474	475 aa	Known RBP	11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	TCN2	P20062	427 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	THOP1	P52888	689 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	RAD23B	P54727	409 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	PPARD	Q03181	441 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	CCDC15	Q0P6D6	951 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	NAA30	Q147X3	362 aa	Predicted RBP	11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	ELOC	Q15369	112 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	ZXDC	Q2QGD7	858 aa	Predicted RBP	11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	ALG11	Q2TAA5	492 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	MCTP1	Q6DN14	999 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	C16orf46	Q6P387	395 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	SPNS3	Q6ZMD2	512 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	MMP21	Q8N119	569 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	CCAR2	Q8N163	923 aa	Known RBP	11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	BMPER	Q8N8U9	685 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	SCG3	Q8WXD2	468 aa	Known RBP	11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	FEM1C	Q96JP0	617 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	C5orf34	Q96MH7	638 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	FEM1A	Q9BSK4	669 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	KCND3	Q9UK17	655 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	LIMCH1	Q9UPQ0	1083 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	WASF2	Q9Y6W5	498 aa		11.95	□□□□□ -0.5
PSMD13-209	ENST00000529372	SMAD6	O43541	496 aa	Known RBP	11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	RFPL1	O75677	317 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	ALPI	P09923	528 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	TACR2	P21452	398 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	NEK3	P51956	506 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	SNRPF	P62306	86 aa	Known RBP	11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	MC1R	Q01726	317 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	HLTF	Q14527	1009 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	MAP9	Q49MG5	647 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	ARSI	Q5FYB1	569 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	RRAGB	Q5VZM2	374 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	RAP1GAP2	Q684P5	730 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	ANKS6	Q68DC2	871 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	STXBP4	Q6ZWJ1	553 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	NLGN4X	Q8N0W4	816 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	GRIN3A	Q8TCU5	1115 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	KCTD13	Q8WZ19	329 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	TSACC	Q96A04	125 aa	Predicted RBP	11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	KIAA1143	Q96AT1	154 aa	Predicted RBP	11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	VOPP1	Q96AW1	172 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	LURAP1	Q96LR2	239 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	CCDC74B	Q96LY2	380 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	HAPLN3	Q96S86	360 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	PRMT1	Q99873	361 aa	Known RBP	11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	BACH2	Q9BYV9	841 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	NIF3L1	Q9GZT8	377 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	LRRC4	Q9HBW1	653 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	OCIAD1	Q9NX40	245 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	LRIT1	Q9P2V4	623 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	SLC25A13	Q9UJS0	675 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372	DOLK	Q9UPQ8	538 aa		11.94	□□□□□ -0.5
PSMD13-209	ENST00000529372		M0QYT0	321 aa		11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	ZNF821	O75541	412 aa	Predicted RBP	11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	LEFTY1	O75610	366 aa		11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	DNAJB5	O75953	348 aa		11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	CBX6	O95503	412 aa		11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	MOCS2	O96007	188 aa	Predicted RBP	11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	PRNP	P04156	253 aa		11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	MAP4	P27816	1152 aa	Known RBP	11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	EIF4A3	P38919	411 aa	Known RBP	11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	IRAK1	P51617	712 aa		11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	PMS2	P54278	862 aa		11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	YPEL5	P62699	121 aa		11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	ABHD18	Q0P651	414 aa		11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	PARS2	Q7L3T8	475 aa	Known RBP	11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	TMEM135	Q86UB9	458 aa		11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	PIM3	Q86V86	326 aa		11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	TP53INP2	Q8IXH6	220 aa		11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	NELFCD	Q8IXH7	590 aa		11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	CCDC65	Q8IXS2	484 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms