RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 NCAM1P13591 858 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 NMBRP28336 390 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 HCAR3P49019 387 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 IRX1P78414 480 aaPredicted RBP16■□□□□ 0.15
TM9SF1-208ENST00000529332 GALNT2Q10471 571 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 TDRD5Q8NAT2 981 aaKnown RBP16■□□□□ 0.15
TM9SF1-208ENST00000529332 HDAC11Q96DB2 347 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 VPS39Q96JC1 886 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 TMEM175Q9BSA9 504 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 DDIT4Q9NX09 232 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 PRG3Q9Y2Y8 225 aaPredicted RBP16■□□□□ 0.15
TM9SF1-208ENST00000529332 ERI2A8K979 691 aaKnown RBP16■□□□□ 0.15
TM9SF1-208ENST00000529332 NCAM2O15394 837 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 AP1G2O75843 785 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 FBXO21O94952 628 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 ITGB1P05556 798 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 CHRNGP07510 517 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 GLDCP23378 1020 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 PRDX6P30041 224 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 CCR10P46092 362 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 NUMBP49757 651 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 CSRP3P50461 194 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 TSPY1Q01534 308 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 YWHAHQ04917 246 aaPredicted RBP16■□□□□ 0.15
TM9SF1-208ENST00000529332 TBL3Q12788 808 aaKnown RBP16■□□□□ 0.15
TM9SF1-208ENST00000529332 ASPHQ12797 758 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 MAPRE1Q15691 268 aaKnown RBP16■□□□□ 0.15
TM9SF1-208ENST00000529332 LRRC36Q1X8D7 754 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 CFAP157Q5JU67 520 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 TCHHL1Q5QJ38 904 aaPredicted RBP16■□□□□ 0.15
TM9SF1-208ENST00000529332 FBXW8Q8N3Y1 598 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 TMEM151AQ8N4L1 468 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 TMEM199Q8N511 208 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 ZSCAN18Q8TBC5 510 aaPredicted RBP16■□□□□ 0.15
TM9SF1-208ENST00000529332 DPF3Q92784 378 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 TSC22D3Q99576 134 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 EBF3Q9H4W6 596 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 OXSMQ9NWU1 459 aa16■□□□□ 0.15
TM9SF1-208ENST00000529332 KIAA0100Q14667 2235 aaKnown RBP15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 CCDC78A2IDD5 438 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 MYBPHLA2RUH7 354 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 EME2A4GXA9 379 aaPredicted RBP15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 TIMM44O43615 452 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 ALDH2P05091 517 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 FESP07332 822 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 SBK3P0C264 359 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 ZCCHC18P0CG32 403 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 MPSTP25325 297 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 NPY2RP49146 381 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 GATMP50440 423 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 CSE1LP55060 971 aaKnown RBP15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 HNRNPDQ14103 355 aaKnown RBP15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 GRM3Q14832 879 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 SFT2D3Q587I9 215 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 FSCBQ5H9T9 825 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 LPCAT4Q643R3 524 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 BHLHA9Q7RTU4 235 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 FAM35AQ86V20 835 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 PDSS2Q86YH6 399 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 HIPK4Q8NE63 616 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 PGAP3Q96FM1 320 aaPredicted RBP15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 PCED1BQ96HM7 432 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 TUBGCP5Q96RT8 1024 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 C1QTNF1Q9BXJ1 281 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 TRHDEQ9UKU6 1024 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 SLC39A10Q9ULF5 831 aa15.99■□□□□ 0.15
TM9SF1-208ENST00000529332 GOLGA8QA0A0J9YX86 632 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 GOLGA8OA6NCC3 632 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 GOLGA8NF8WBI6 632 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 TK2O00142 265 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 SYN3O14994 580 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 RNASEH1O60930 286 aaKnown RBP15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 JCHAINP01591 159 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 INTS6LQ5JSJ4 861 aaKnown RBP15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 RAB41Q5JT25 222 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 THEMIS2Q5TEJ8 643 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 SPDYE1Q8NFV5 336 aaPredicted RBP15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 EDEM1Q92611 657 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 JADE3Q92613 823 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 TEKT5Q96M29 485 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 LENG8Q96PV6 779 aaPredicted RBP15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 IL22Q9GZX6 179 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 BRD8Q9H0E9 1235 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 WDR55Q9H6Y2 383 aaPredicted RBP15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 TCF7L2Q9NQB0 619 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 CNGB3Q9NQW8 809 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 ARHGAP26Q9UNA1 814 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 MAGEB16A2A368 324 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 TRIM43BA6NCK2 446 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 HHLA1C9JL84 531 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 F8W810 466 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 ZNF189O75820 626 aaPredicted RBP15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 MTTPP55157 894 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 ELAVL2Q12926 359 aaKnown RBP15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 MSLNQ13421 630 aaPredicted RBP15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 METTL21CQ5VZV1 264 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 ITPRIPL1Q6GPH6 555 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 OTOP3Q7RTS5 596 aa15.98■□□□□ 0.15
TM9SF1-208ENST00000529332 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms