RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 BLKP51451 505 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 IRAK1P51617 712 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 GEMIN4P57678 1058 aaKnown RBP11.77□□□□□ -0.53
CMTM1-211ENST00000528484 SLC6A3Q01959 620 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 PTK2Q05397 1052 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 DEUP1Q05D60 604 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 NFATC3Q12968 1075 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 ARHGAP44Q17R89 818 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 CARD16Q5EG05 197 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 PRRT3Q5FWE3 981 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 C6orf132Q5T0Z8 1188 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 FAXCQ5TGI0 409 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 FOXR2Q6PJQ5 311 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 USP53Q70EK8 1073 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 SLC26A9Q7LBE3 791 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 C14orf80Q86SX3 495 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 CLEC14AQ86T13 490 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 JAMLQ86YT9 394 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 TRIM59Q8IWR1 403 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 ZSCAN1Q8NBB4 408 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 C1orf131Q8NDD1 294 aaKnown RBP11.77□□□□□ -0.53
CMTM1-211ENST00000528484 SPATA20Q8TB22 786 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 NELFBQ8WX92 580 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 TBATAQ96M53 351 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 PSMB7Q99436 277 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 ZDHHC6Q9H6R6 413 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 ATP13A1Q9HD20 1204 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 GPR27Q9NS67 375 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.77□□□□□ -0.53
CMTM1-211ENST00000528484 SEPT10Q9P0V9 454 aa11.77□□□□□ -0.53
CMTM1-211ENST00000528484 ATXN7L1Q9ULK2 861 aaPredicted RBP11.77□□□□□ -0.53
CMTM1-211ENST00000528484 A0A0D9SEW6 157 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 IGLON5A6NGN9 336 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 LMO7DNF2Z398 122 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 PLD2O14939 933 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 SRGAP2O75044 1071 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 CCNHP51946 323 aaPredicted RBP11.76□□□□□ -0.53
CMTM1-211ENST00000528484 ADKP55263 362 aaKnown RBP11.76□□□□□ -0.53
CMTM1-211ENST00000528484 RNASE9P60153 205 aaKnown RBP11.76□□□□□ -0.53
CMTM1-211ENST00000528484 YPEL5P62699 121 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 SKOR1P84550 965 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 CLN3Q13286 438 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 POLD3Q15054 466 aaPredicted RBP11.76□□□□□ -0.53
CMTM1-211ENST00000528484 ARL13BQ3SXY8 428 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 ALFQ53S48 1182 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 ISM2Q6H9L7 571 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 TTI2Q6NXR4 508 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 OLFML1Q6UWY5 402 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 PHACTR4Q8IZ21 702 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 FBXO39Q8N4B4 442 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 MSANTD4Q8NCY6 345 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 ASB12Q8WXK4 309 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 LIN37Q96GY3 246 aaPredicted RBP11.76□□□□□ -0.53
CMTM1-211ENST00000528484 C1orf74Q96LT6 269 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 TIGD1Q96MW7 591 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 CCDC3Q9BQI4 270 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 BOCQ9BWV1 1114 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 EPB41L5Q9HCM4 733 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 PIGVQ9NUD9 493 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 ARHGEF38Q9NXL2 777 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 HECAQ9UBI9 543 aaPredicted RBP11.76□□□□□ -0.53
CMTM1-211ENST00000528484 HPCAL4Q9UM19 191 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 PCDHGC3Q9UN70 934 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 CTNND2Q9UQB3 1225 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 SSUH2Q9Y2M2 353 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 WASF2Q9Y6W5 498 aa11.76□□□□□ -0.53
CMTM1-211ENST00000528484 RP1P56715 2156 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 DRGXA6NNA5 263 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 PYCARD-AS1I3L0S3 204 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 TOR1BO14657 336 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 RAD51BO15315 384 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 ALPIP09923 528 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 JMJD7P0C870 316 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 CTSEP14091 401 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 CXCR3P49682 368 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 MARSP56192 900 aaKnown RBP11.75□□□□□ -0.53
CMTM1-211ENST00000528484 PPARDQ03181 441 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 RAD51Q06609 339 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 PAK1Q13153 545 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 ELOCQ15369 112 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 SMYD5Q6GMV2 418 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 GBP6Q6ZN66 633 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 PARS2Q7L3T8 475 aaKnown RBP11.75□□□□□ -0.53
CMTM1-211ENST00000528484 CREBRFQ8IUR6 639 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 SLC35F3Q8IY50 421 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 FSTL5Q8N475 847 aaPredicted RBP11.75□□□□□ -0.53
CMTM1-211ENST00000528484 ARL10Q8N8L6 244 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 ZNF397Q8NF99 534 aaPredicted RBP11.75□□□□□ -0.53
CMTM1-211ENST00000528484 OR7D4Q8NG98 312 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 OR6C4Q8NGE1 309 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 SGF29Q96ES7 293 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 TMEM74Q96NL1 305 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 GFM1Q96RP9 751 aaKnown RBP11.75□□□□□ -0.53
CMTM1-211ENST00000528484 C1QTNF2Q9BXJ5 285 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 OSBPL1AQ9BXW6 950 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 ZYG11BQ9C0D3 744 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 ACP6Q9NPH0 428 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 MPP6Q9NZW5 540 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 GULP1Q9UBP9 304 aa11.75□□□□□ -0.53
CMTM1-211ENST00000528484 APEX2Q9UBZ4 518 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms