RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 HAPLN3Q96S86 360 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 FEM1AQ9BSK4 669 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 CALN1Q9BXU9 219 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 TKTL2Q9H0I9 626 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 PIGVQ9NUD9 493 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 COX16Q9P0S2 106 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 NOCTQ9UK39 431 aaKnown RBP10.76□□□□□ -0.69
CPSF1-203ENST00000527916 VANGL2Q9ULK5 521 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 CA5BQ9Y2D0 317 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 SIK3Q9Y2K2 1263 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 IGLV3-10A0A075B6K4 115 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 CPED1A4D0V7 1026 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 SLC31A1O15431 190 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 ATP9BO43861 1147 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 ADCY5O95622 1261 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 MBD3O95983 291 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 ITGA2BP08514 1039 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 GIMD1P0DJR0 217 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 GP1BBP13224 206 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 MYF5P13349 255 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 PDGFRAP16234 1089 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 ZNF18P17022 549 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 TFE3P19532 575 aaPredicted RBP10.75□□□□□ -0.69
CPSF1-203ENST00000527916 TGM2P21980 687 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 MMP8P22894 467 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 SOX5P35711 763 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 SULT1E1P49888 294 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 POLR2FP61218 127 aaKnown RBP10.75□□□□□ -0.69
CPSF1-203ENST00000527916 MYL5Q02045 173 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 CNTN1Q12860 1018 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 STX1AQ16623 288 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 FAM102AQ5T9C2 384 aaPredicted RBP10.75□□□□□ -0.69
CPSF1-203ENST00000527916 AGBL4Q5VU57 503 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 TAF3Q5VWG9 929 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 LRRC31Q6UY01 552 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 TRIM72Q6ZMU5 477 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 EFL1Q7Z2Z2 1120 aaKnown RBP10.75□□□□□ -0.69
CPSF1-203ENST00000527916 C14orf80Q86SX3 495 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 ZNF683Q8IZ20 524 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 WDR48Q8TAF3 677 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 PRR11Q96HE9 360 aaPredicted RBP10.75□□□□□ -0.69
CPSF1-203ENST00000527916 SEMA3CQ99985 751 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 SIK2Q9H0K1 926 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 RETREG1Q9H6L5 497 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 DNAJC28Q9NX36 388 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 ENTPD2Q9Y5L3 495 aa10.75□□□□□ -0.69
CPSF1-203ENST00000527916 CCDC187A0A096LP49 1063 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 LY6G6EA0A0G2JKS1 128 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 A0A1W2PNU3 283 aaPredicted RBP10.74□□□□□ -0.69
CPSF1-203ENST00000527916 A0A1W2PQU0 124 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 H3BM21 787 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 I6L893 689 aaPredicted RBP10.74□□□□□ -0.69
CPSF1-203ENST00000527916 ALOX15BO15296 676 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 GFPT2O94808 682 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 PRLRP16471 622 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 HNRNPA2B1P22626 353 aaKnown RBP10.74□□□□□ -0.69
CPSF1-203ENST00000527916 FLT3P36888 993 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 STAT1P42224 750 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 RPIAP49247 311 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 STK19P49842 368 aaPredicted RBP10.74□□□□□ -0.69
CPSF1-203ENST00000527916 KLK7P49862 253 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 METAP1P53582 386 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 COPB1P53618 953 aaKnown RBP10.74□□□□□ -0.69
CPSF1-203ENST00000527916 NFKB2Q00653 900 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 FMO1Q01740 532 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 CENPCQ03188 943 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 UBAP2LQ14157 1087 aaKnown RBP10.74□□□□□ -0.69
CPSF1-203ENST00000527916 CDKN3Q16667 212 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 LINC00303Q3SY05 128 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 ACCSLQ4AC99 568 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 NAA35Q5VZE5 725 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 ZNF783Q6ZMS7 281 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 CIR1Q86X95 450 aaPredicted RBP10.74□□□□□ -0.69
CPSF1-203ENST00000527916 OR13H1Q8NG92 308 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 OR52K2Q8NGK3 314 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 CPA5Q8WXQ8 436 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 EXTL1Q92935 676 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 GLMNQ92990 594 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 ARRDC3Q96B67 414 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 ERGIC2Q96RQ1 377 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 TBCBQ99426 244 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 MYOCQ99972 504 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 ANLNQ9NQW6 1124 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 FAM207AQ9NSI2 230 aaPredicted RBP10.74□□□□□ -0.69
CPSF1-203ENST00000527916 SLC25A13Q9UJS0 675 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 SARDHQ9UL12 918 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 PPM1HQ9ULR3 514 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 CSNK1G3Q9Y6M4 447 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 U3KQA8 63 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 CHD5Q8TDI0 1954 aa10.74□□□□□ -0.69
CPSF1-203ENST00000527916 RELNP78509 3460 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 CXorf51AA0A1B0GTR3 108 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 LGALS16A8MUM7 142 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 MCF2LO15068 1137 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 EPHB6O15197 1021 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 PPFIA2O75334 1257 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 NEBLO76041 1014 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 FAM87AP0C7U9 286 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 UNGP13051 313 aaPredicted RBP10.73□□□□□ -0.69
CPSF1-203ENST00000527916 VAV1P15498 845 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms