RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 IQSEC1Q6DN90 963 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 CIR1Q86X95 450 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-216ENST00000527467 NAT14Q8WUY8 206 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 TMEM169Q96HH4 297 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 MUC3BQ9H195 1237 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 ACTR8Q9H981 624 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 CLK4Q9HAZ1 481 aaKnown RBP7.32□□□□□ -1.24
CTNND1-216ENST00000527467 PNMA6EA0A0J9YXQ4 647 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 ABLIM1O14639 778 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 DNTTP04053 509 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 TPBGLP0DKB5 382 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 IFI30P13284 250 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 TNNI3P19429 210 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 ITGALP20701 1170 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 EPHB2P29323 1055 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 COILP38432 576 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-216ENST00000527467 NDUFV1P49821 464 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 OAZ1P54368 228 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 PRKAA2P54646 552 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 TNK2Q07912 1038 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 E2F2Q14209 437 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 GXYLT1Q4G148 440 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 MIIPQ5JXC2 388 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 CDKL4Q5MAI5 379 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 FAM171BQ6P995 826 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 ATG9AQ7Z3C6 839 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 GUF1Q8N442 669 aaKnown RBP7.31□□□□□ -1.24
CTNND1-216ENST00000527467 FIBCD1Q8N539 461 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 BLOC1S5Q8TDH9 187 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 MAP4K1Q92918 833 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 TRIM43Q96BQ3 446 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-216ENST00000527467 PHF12Q96QT6 1004 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 CDRT15Q96T59 188 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 MRPL9Q9BYD2 267 aaKnown RBP7.31□□□□□ -1.24
CTNND1-216ENST00000527467 TBC1D14Q9P2M4 693 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 RPS6KL1Q9Y6S9 549 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 NCF1BA6NI72 391 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-216ENST00000527467 NCF1CA8MVU1 366 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-216ENST00000527467 TTC34A8MYJ7 566 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 SGPL1O95470 568 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 FESP07332 822 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 ERVK-10P10266 1014 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 NCF1P14598 390 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-216ENST00000527467 HALP42357 657 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 GEMP55040 296 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 SMIM11AP58511 58 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 RIPPLY1Q0D2K3 151 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 COASYQ13057 564 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 DUOXA2Q1HG44 320 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 GLRA4Q5JXX5 417 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 XRRA1Q6P2D8 792 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 AAGABQ6PD74 315 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 ZC3H14Q6PJT7 736 aaKnown RBP7.31□□□□□ -1.24
CTNND1-216ENST00000527467 CRELD2Q6UXH1 353 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-216ENST00000527467 FRMD5Q7Z6J6 570 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 POF1BQ8WVV4 589 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 OXNAD1Q96HP4 312 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-216ENST00000527467 TMEM117Q9H0C3 514 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 CYP4F12Q9HCS2 524 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 A1CFQ9NQ94 594 aaKnown RBP7.31□□□□□ -1.24
CTNND1-216ENST00000527467 CHST12Q9NRB3 414 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 ZNF225Q9UK10 706 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 ACOT9Q9Y305 439 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 MYO5BQ9ULV0 1848 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 MSH4O15457 936 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 RSL1D1O76021 490 aaKnown RBP7.31□□□□□ -1.24
CTNND1-216ENST00000527467 P4HBP07237 508 aaKnown RBP7.31□□□□□ -1.24
CTNND1-216ENST00000527467 AVPR1AP37288 418 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 GALCP54803 685 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 RAB5BP61020 215 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 RFX4Q33E94 735 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 HSD17B12Q53GQ0 312 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 INTS6LQ5JSJ4 861 aaKnown RBP7.31□□□□□ -1.24
CTNND1-216ENST00000527467 HECTD3Q5T447 861 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 FBXO33Q7Z6M2 555 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 SLC7A14Q8TBB6 771 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 ZSCAN18Q8TBC5 510 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-216ENST00000527467 RAD54LQ92698 747 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 RIPOR3Q96MK2 946 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 HGH1Q9BTY7 390 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 FRMD8P1Q9BZ68 369 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-216ENST00000527467 NDUFAF4Q9P032 175 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 ZNF639Q9UID6 485 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 PADI2Q9Y2J8 665 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 HIF3AQ9Y2N7 669 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 MAU2Q9Y6X3 613 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 CYP26A1O43174 497 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 TEX33O43247 280 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 NARSO43776 548 aaKnown RBP7.31□□□□□ -1.24
CTNND1-216ENST00000527467 MAGP20916 626 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 BGNP21810 368 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 ECHS1P30084 290 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 SEPHS1P49903 392 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 CCNG1P51959 295 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 RTP1P59025 263 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 SLC20A2Q08357 652 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 PAGE2BQ5JRK9 111 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 PIK3R6Q5UE93 754 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 IRAK1BP1Q5VVH5 260 aa7.31□□□□□ -1.24
CTNND1-216ENST00000527467 RAB12Q6IQ22 244 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms