RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 CNTD1Q8N815 330 aa16.88■□□□□ 0.29
SMCO4-204ENST00000527149 CCNYQ8ND76 341 aa16.88■□□□□ 0.29
SMCO4-204ENST00000527149 TMIEQ8NEW7 156 aa16.88■□□□□ 0.29
SMCO4-204ENST00000527149 PIP4K2CQ8TBX8 421 aa16.88■□□□□ 0.29
SMCO4-204ENST00000527149 GRIN3AQ8TCU5 1115 aa16.88■□□□□ 0.29
SMCO4-204ENST00000527149 PRCCQ92733 491 aaPredicted RBP16.88■□□□□ 0.29
SMCO4-204ENST00000527149 FAM118BQ9BPY3 351 aa16.88■□□□□ 0.29
SMCO4-204ENST00000527149 HEPHQ9BQS7 1158 aa16.88■□□□□ 0.29
SMCO4-204ENST00000527149 IL36AQ9UHA7 158 aa16.88■□□□□ 0.29
SMCO4-204ENST00000527149 EVLQ9UI08 416 aaPredicted RBP16.88■□□□□ 0.29
SMCO4-204ENST00000527149 IGHV1OR15-9A0A0B4J2B8 117 aa16.87■□□□□ 0.29
SMCO4-204ENST00000527149 HACD1B0YJ81 288 aa16.87■□□□□ 0.29
SMCO4-204ENST00000527149 C10orf142B7Z368 130 aa16.87■□□□□ 0.29
SMCO4-204ENST00000527149 LEFTY1O75610 366 aa16.87■□□□□ 0.29
SMCO4-204ENST00000527149 ADH1BP00325 375 aa16.87■□□□□ 0.29
SMCO4-204ENST00000527149 HLA-DQB2P05538 268 aa16.87■□□□□ 0.29
SMCO4-204ENST00000527149 CCNB1P14635 433 aa16.87■□□□□ 0.29
SMCO4-204ENST00000527149 HSPA9P38646 679 aaKnown RBP16.87■□□□□ 0.29
SMCO4-204ENST00000527149 RECQLP46063 649 aaPredicted RBP16.87■□□□□ 0.29
SMCO4-204ENST00000527149 TPMTP51580 245 aa16.87■□□□□ 0.29
SMCO4-204ENST00000527149 GNG11P61952 73 aa16.87■□□□□ 0.29
SMCO4-204ENST00000527149 NSUN2Q08J23 767 aaKnown RBP eCLIP16.87■□□□□ 0.29
SMCO4-204ENST00000527149 AP1B1Q10567 949 aa16.87■□□□□ 0.29
SMCO4-204ENST00000527149 WASHC5Q12768 1159 aa16.87■□□□□ 0.29
SMCO4-204ENST00000527149 SRSF5Q13243 272 aaKnown RBP16.87■□□□□ 0.29
SMCO4-204ENST00000527149 IHHQ14623 411 aa16.87■□□□□ 0.29
SMCO4-204ENST00000527149 SLC45A4Q5BKX6 768 aa16.87■□□□□ 0.29
SMCO4-204ENST00000527149 MARC1Q5VT66 337 aa16.87■□□□□ 0.29
SMCO4-204ENST00000527149 ZC3H18Q86VM9 953 aaKnown RBP16.87■□□□□ 0.29
SMCO4-204ENST00000527149 FAM160A2Q8N612 972 aaPredicted RBP16.87■□□□□ 0.29
SMCO4-204ENST00000527149 FRMD1Q8N878 549 aa16.87■□□□□ 0.29
SMCO4-204ENST00000527149 SLC35B2Q8TB61 432 aa16.87■□□□□ 0.29
SMCO4-204ENST00000527149 TFB1MQ8WVM0 346 aaKnown RBP16.87■□□□□ 0.29
SMCO4-204ENST00000527149 ZDHHC6Q9H6R6 413 aa16.87■□□□□ 0.29
SMCO4-204ENST00000527149 ITM2CQ9NQX7 267 aa16.87■□□□□ 0.29
SMCO4-204ENST00000527149 AMACRQ9UHK6 382 aa16.87■□□□□ 0.29
SMCO4-204ENST00000527149 MBD1Q9UIS9 605 aaPredicted RBP16.87■□□□□ 0.29
SMCO4-204ENST00000527149 SNX12Q9UMY4 172 aa16.87■□□□□ 0.29
SMCO4-204ENST00000527149 ZKSCAN5Q9Y2L8 839 aa16.87■□□□□ 0.29
SMCO4-204ENST00000527149 RIF1Q5UIP0 2472 aaKnown RBP16.86■□□□□ 0.29
SMCO4-204ENST00000527149 HRO43593 1189 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 RNASEH1O60930 286 aaKnown RBP16.86■□□□□ 0.29
SMCO4-204ENST00000527149 POP4O95707 220 aaKnown RBP16.86■□□□□ 0.29
SMCO4-204ENST00000527149 IL1BP01584 269 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 PRNPP04156 253 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 C5AR1P21730 350 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 BCKDHBP21953 392 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 MSNP26038 577 aaKnown RBP16.86■□□□□ 0.29
SMCO4-204ENST00000527149 SLC8A1P32418 973 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 RENBPP51606 427 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 PTPN5P54829 565 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 MAXP61244 160 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 ARSIQ5FYB1 569 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 CCDC181Q5TID7 509 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 AGBL4Q5VU57 503 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 SRLQ86TD4 932 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 PGBD3Q8N328 593 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 RASGEF1CQ8N431 466 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 ARRDC2Q8TBH0 407 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 COG1Q8WTW3 980 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 NSMCE1Q8WV22 266 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 GAB3Q8WWW8 586 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 RLN3Q8WXF3 142 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 ARRDC3Q96B67 414 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 LRIG1Q96JA1 1093 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 CEP41Q9BYV8 373 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 CPEB1Q9BZB8 566 aaKnown RBP16.86■□□□□ 0.29
SMCO4-204ENST00000527149 C10orf88Q9H8K7 445 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 NT5MQ9NPB1 228 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 RBM22Q9NW64 420 aaKnown RBP eCLIP16.86■□□□□ 0.29
SMCO4-204ENST00000527149 SCML1Q9UN30 329 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 ATP8A1Q9Y2Q0 1164 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 FARP1Q9Y4F1 1045 aaPredicted RBP16.86■□□□□ 0.29
SMCO4-204ENST00000527149 R4GN57 208 aa16.86■□□□□ 0.29
SMCO4-204ENST00000527149 EP300Q09472 2414 aaPredicted RBP16.85■□□□□ 0.29
SMCO4-204ENST00000527149 TNRC6BQ9UPQ9 1833 aaKnown RBP16.85■□□□□ 0.29
SMCO4-204ENST00000527149 TTC24A2A3L6 582 aaPredicted RBP16.85■□□□□ 0.29
SMCO4-204ENST00000527149 C1QTNF3-AMACRE9PGA6 284 aa16.85■□□□□ 0.29
SMCO4-204ENST00000527149 PLK4O00444 970 aa16.85■□□□□ 0.29
SMCO4-204ENST00000527149 KRIT1O00522 736 aa16.85■□□□□ 0.29
SMCO4-204ENST00000527149 ZBTB24O43167 697 aaPredicted RBP16.85■□□□□ 0.29
SMCO4-204ENST00000527149 CEP104O60308 925 aa16.85■□□□□ 0.29
SMCO4-204ENST00000527149 ZNF217O75362 1048 aa16.85■□□□□ 0.29
SMCO4-204ENST00000527149 JCHAINP01591 159 aa16.85■□□□□ 0.29
SMCO4-204ENST00000527149 FGGP02679 453 aa16.85■□□□□ 0.29
SMCO4-204ENST00000527149 DNTTP04053 509 aa16.85■□□□□ 0.29
SMCO4-204ENST00000527149 RBP3P10745 1247 aa16.85■□□□□ 0.29
SMCO4-204ENST00000527149 PTPN3P26045 913 aa16.85■□□□□ 0.29
SMCO4-204ENST00000527149 EIF3EP60228 445 aaKnown RBP16.85■□□□□ 0.29
SMCO4-204ENST00000527149 AP1S1P61966 158 aa16.85■□□□□ 0.29
SMCO4-204ENST00000527149 POM121L1PQ3SYA9 428 aa16.85■□□□□ 0.29
SMCO4-204ENST00000527149 TTC31Q49AM3 519 aaPredicted RBP16.85■□□□□ 0.29
SMCO4-204ENST00000527149 NYAP1Q6ZVC0 841 aa16.85■□□□□ 0.29
SMCO4-204ENST00000527149 USP30Q70CQ3 517 aa16.85■□□□□ 0.29
SMCO4-204ENST00000527149 RYBPQ8N488 228 aaPredicted RBP16.85■□□□□ 0.29
SMCO4-204ENST00000527149 TTC13Q8NBP0 860 aa16.85■□□□□ 0.29
SMCO4-204ENST00000527149 ATG4AQ8WYN0 398 aa16.85■□□□□ 0.29
SMCO4-204ENST00000527149 NUDCD1Q96RS6 583 aa16.85■□□□□ 0.29
SMCO4-204ENST00000527149 OSBPL9Q96SU4 736 aa16.85■□□□□ 0.29
SMCO4-204ENST00000527149 NOD2Q9HC29 1040 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms