RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 SOX13Q9UN79 622 aa20.79■□□□□ 0.92
SMCO4-203ENST00000526869 C2orf16Q68DN1 1984 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 POC1B-GALNT4F8VUJ3 575 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 RFXAPO00287 272 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 MUSKO15146 869 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 USP1O94782 785 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 HOXB8P17481 243 aaPredicted RBP20.78■□□□□ 0.92
SMCO4-203ENST00000526869 CR2P20023 1033 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 MSH2P43246 934 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 MAGOHP61326 146 aaKnown RBP20.78■□□□□ 0.92
SMCO4-203ENST00000526869 NSUN2Q08J23 767 aaKnown RBP eCLIP20.78■□□□□ 0.92
SMCO4-203ENST00000526869 LMAN2Q12907 356 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 ANKRD54Q6NXT1 300 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 ADGRD1Q6QNK2 874 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 LEKR1Q6ZMV7 388 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 TPGS1Q6ZTW0 290 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 TAOK1Q7L7X3 1001 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 NPAS3Q8IXF0 933 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 SLC44A1Q8WWI5 657 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 PAFAH2Q99487 392 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 APOL2Q9BQE5 337 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 KIFC1Q9BW19 673 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 SLC2A11Q9BYW1 496 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 TRPV4Q9HBA0 871 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 SPHK2Q9NRA0 654 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 OBP2AQ9NY56 170 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 GDE1Q9NZC3 331 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 ZNF180Q9UJW8 692 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 ACTL7BQ9Y614 415 aa20.78■□□□□ 0.92
SMCO4-203ENST00000526869 LOC285095A0A1B0GVY8 99 aa20.77■□□□□ 0.92
SMCO4-203ENST00000526869 SNAP91O60641 907 aa20.77■□□□□ 0.92
SMCO4-203ENST00000526869 TMCC1O94876 653 aa20.77■□□□□ 0.92
SMCO4-203ENST00000526869 CD160O95971 181 aa20.77■□□□□ 0.92
SMCO4-203ENST00000526869 SERPINF2P08697 491 aa20.77■□□□□ 0.92
SMCO4-203ENST00000526869 CRADDP78560 199 aa20.77■□□□□ 0.92
SMCO4-203ENST00000526869 SLC20A2Q08357 652 aa20.77■□□□□ 0.92
SMCO4-203ENST00000526869 PLEKHG6Q3KR16 790 aa20.77■□□□□ 0.92
SMCO4-203ENST00000526869 KBTBD12Q3ZCT8 623 aa20.77■□□□□ 0.92
SMCO4-203ENST00000526869 TCEAL5Q5H9L2 206 aa20.77■□□□□ 0.92
SMCO4-203ENST00000526869 PCID2Q5JVF3 399 aa20.77■□□□□ 0.92
SMCO4-203ENST00000526869 CERCAMQ5T4B2 595 aa20.77■□□□□ 0.92
SMCO4-203ENST00000526869 TMEM25Q86YD3 366 aa20.77■□□□□ 0.92
SMCO4-203ENST00000526869 NUDCD1Q96RS6 583 aa20.77■□□□□ 0.92
SMCO4-203ENST00000526869 RANBP9Q96S59 729 aa20.77■□□□□ 0.92
SMCO4-203ENST00000526869 PRO3102Q9H379 93 aa20.77■□□□□ 0.92
SMCO4-203ENST00000526869 IGFLR1Q9H665 355 aa20.77■□□□□ 0.92
SMCO4-203ENST00000526869 PIH1D1Q9NWS0 290 aaKnown RBP20.77■□□□□ 0.92
SMCO4-203ENST00000526869 SENP1Q9P0U3 644 aa20.77■□□□□ 0.92
SMCO4-203ENST00000526869 INSIG1O15503 277 aa20.76■□□□□ 0.91
SMCO4-203ENST00000526869 HLA-DPA1P20036 260 aa20.76■□□□□ 0.91
SMCO4-203ENST00000526869 PPP2R2AP63151 447 aa20.76■□□□□ 0.91
SMCO4-203ENST00000526869 DMC1Q14565 340 aa20.76■□□□□ 0.91
SMCO4-203ENST00000526869 CBX2Q14781 532 aaPredicted RBP20.76■□□□□ 0.91
SMCO4-203ENST00000526869 SYCE2Q6PIF2 218 aa20.76■□□□□ 0.91
SMCO4-203ENST00000526869 LRRC6Q86X45 466 aa20.76■□□□□ 0.91
SMCO4-203ENST00000526869 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.76■□□□□ 0.91
SMCO4-203ENST00000526869 PPHLN1Q8NEY8 458 aaKnown RBP20.76■□□□□ 0.91
SMCO4-203ENST00000526869 DCAKDQ8WVC6 231 aa20.76■□□□□ 0.91
SMCO4-203ENST00000526869 SMARCD2Q92925 531 aa20.76■□□□□ 0.91
SMCO4-203ENST00000526869 BHMTQ93088 406 aa20.76■□□□□ 0.91
SMCO4-203ENST00000526869 ASB16Q96NS5 453 aa20.76■□□□□ 0.91
SMCO4-203ENST00000526869 ABCB8Q9NUT2 735 aa20.76■□□□□ 0.91
SMCO4-203ENST00000526869 CTNNAL1Q9UBT7 734 aa20.76■□□□□ 0.91
SMCO4-203ENST00000526869 PRKAG3Q9UGI9 489 aa20.76■□□□□ 0.91
SMCO4-203ENST00000526869 ARIH1Q9Y4X5 557 aaPredicted RBP20.76■□□□□ 0.91
SMCO4-203ENST00000526869 IKBKGQ9Y6K9 419 aa20.76■□□□□ 0.91
SMCO4-203ENST00000526869 RPS6KL1Q9Y6S9 549 aa20.76■□□□□ 0.91
SMCO4-203ENST00000526869 FAM169AQ9Y6X4 670 aa20.76■□□□□ 0.91
SMCO4-203ENST00000526869 FGF1P05230 155 aa20.75■□□□□ 0.91
SMCO4-203ENST00000526869 INHBAP08476 426 aa20.75■□□□□ 0.91
SMCO4-203ENST00000526869 ADRA1DP25100 572 aa20.75■□□□□ 0.91
SMCO4-203ENST00000526869 IHHQ14623 411 aa20.75■□□□□ 0.91
SMCO4-203ENST00000526869 EFTUD2Q15029 972 aaKnown RBP eCLIP20.75■□□□□ 0.91
SMCO4-203ENST00000526869 TMED2Q15363 201 aa20.75■□□□□ 0.91
SMCO4-203ENST00000526869 SLC1A5Q15758 541 aa20.75■□□□□ 0.91
SMCO4-203ENST00000526869 ANKRD20A4Q4UJ75 823 aa20.75■□□□□ 0.91
SMCO4-203ENST00000526869 MARK2Q7KZI7 788 aaKnown RBP20.75■□□□□ 0.91
SMCO4-203ENST00000526869 SLC26A11Q86WA9 606 aa20.75■□□□□ 0.91
SMCO4-203ENST00000526869 ADGRG2Q8IZP9 1017 aa20.75■□□□□ 0.91
SMCO4-203ENST00000526869 APCDD1Q8J025 514 aa20.75■□□□□ 0.91
SMCO4-203ENST00000526869 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.75■□□□□ 0.912e-6■■■□□ 17.7
SMCO4-203ENST00000526869 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.75■□□□□ 0.91
SMCO4-203ENST00000526869 CDKL2Q92772 493 aa20.75■□□□□ 0.91
SMCO4-203ENST00000526869 FGF13Q92913 245 aa20.75■□□□□ 0.91
SMCO4-203ENST00000526869 BBS2Q9BXC9 721 aa20.75■□□□□ 0.91
SMCO4-203ENST00000526869 CNOT10Q9H9A5 744 aaKnown RBP20.75■□□□□ 0.91
SMCO4-203ENST00000526869 PLK2Q9NYY3 685 aa20.75■□□□□ 0.91
SMCO4-203ENST00000526869 LHX3Q9UBR4 397 aa20.75■□□□□ 0.91
SMCO4-203ENST00000526869 ADAM21Q9UKJ8 722 aa20.75■□□□□ 0.91
SMCO4-203ENST00000526869 WNT6Q9Y6F9 365 aa20.75■□□□□ 0.91
SMCO4-203ENST00000526869 A6NNZ2 444 aa20.74■□□□□ 0.91
SMCO4-203ENST00000526869 ATP9BO43861 1147 aa20.74■□□□□ 0.91
SMCO4-203ENST00000526869 CD70P32970 193 aa20.74■□□□□ 0.91
SMCO4-203ENST00000526869 CSNK1DP48730 415 aa20.74■□□□□ 0.91
SMCO4-203ENST00000526869 SERPINH1P50454 418 aaKnown RBP20.74■□□□□ 0.91
SMCO4-203ENST00000526869 CDK18Q07002 472 aa20.74■□□□□ 0.91
SMCO4-203ENST00000526869 MGAT5Q09328 741 aa20.74■□□□□ 0.91
SMCO4-203ENST00000526869 ADAM15Q13444 863 aa20.74■□□□□ 0.91
SMCO4-203ENST00000526869 LAMB3Q13751 1172 aa20.74■□□□□ 0.91
SMCO4-203ENST00000526869 PCSK7Q16549 785 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms