RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 NEK5Q6P3R8 708 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 OLFML1Q6UWY5 402 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 LRRC31Q6UY01 552 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 CCDC81Q6ZN84 652 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 PARS2Q7L3T8 475 aaKnown RBP6.7□□□□□ -1.34
CD44-221ENST00000526000 ABI3BPQ7Z7G0 1075 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 SLC47A2Q86VL8 602 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 FAM131BQ86XD5 332 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 ZNF354CQ86Y25 554 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 SLC35F3Q8IY50 421 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 Q8N9G6 341 aaPredicted RBP6.7□□□□□ -1.34
CD44-221ENST00000526000 EXD3Q8N9H8 876 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 MLKLQ8NB16 471 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 TTC9Q92623 222 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 TSACCQ96A04 125 aaPredicted RBP6.7□□□□□ -1.34
CD44-221ENST00000526000 KLHL32Q96NJ5 620 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 SLC46A1Q96NT5 459 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 KLF6Q99612 283 aaPredicted RBP6.7□□□□□ -1.34
CD44-221ENST00000526000 C2orf49Q9BVC5 232 aaPredicted RBP6.7□□□□□ -1.34
CD44-221ENST00000526000 DUSP23Q9BVJ7 150 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 HDAC8Q9BY41 377 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 FOXP3Q9BZS1 431 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 ATP13A1Q9HD20 1204 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 MBNL1Q9NR56 388 aaKnown RBP6.7□□□□□ -1.34
CD44-221ENST00000526000 HECAQ9UBI9 543 aaPredicted RBP6.7□□□□□ -1.34
CD44-221ENST00000526000 DNAI1Q9UI46 699 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 DNAJC12Q9UKB3 198 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 PNMA8BQ9ULN7 279 aaPredicted RBP6.7□□□□□ -1.34
CD44-221ENST00000526000 PADI4Q9UM07 663 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 DOLKQ9UPQ8 538 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 HS3ST2Q9Y278 367 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 COQ6Q9Y2Z9 468 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 HELZ2Q9BYK8 2649 aaKnown RBP6.7□□□□□ -1.34
CD44-221ENST00000526000 ZNF462Q96JM2 2506 aa6.7□□□□□ -1.34
CD44-221ENST00000526000 SPTY2D1-AS1A0A0U1RR47 76 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 BICDL2A1A5D9 508 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 EME2A4GXA9 379 aaPredicted RBP6.69□□□□□ -1.34
CD44-221ENST00000526000 C16orf96A6NNT2 1141 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 H3BM21 787 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 YY2O15391 372 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 ARHGAP6O43182 974 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 DAB1O75553 588 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 ZMPSTE24O75844 475 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 GJB6O95452 261 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 GNA14O95837 355 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 PRKCGP05129 697 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 UGT2B4P06133 528 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 ANXA6P08133 673 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 GLI1P08151 1106 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 TSHRP16473 764 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 PON1P27169 355 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 CLCN1P35523 988 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 MTIF2P46199 727 aaKnown RBP6.69□□□□□ -1.34
CD44-221ENST00000526000 RABIFP47224 123 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 CXCR3P49682 368 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 VASPP50552 380 aaPredicted RBP6.69□□□□□ -1.34
CD44-221ENST00000526000 THOP1P52888 689 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 ERVPABLB-1P60509 514 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 ARF5P84085 180 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 PAK1Q13153 545 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 CLN3Q13286 438 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 MORC3Q14149 939 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 CAMK4Q16566 473 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 CDO1Q16878 200 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 C6orf132Q5T0Z8 1188 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 FAM102AQ5T9C2 384 aaPredicted RBP6.69□□□□□ -1.34
CD44-221ENST00000526000 RWDD4Q6NW29 188 aaKnown RBP6.69□□□□□ -1.34
CD44-221ENST00000526000 ZCCHC8Q6NZY4 707 aaKnown RBP6.69□□□□□ -1.34
CD44-221ENST00000526000 TRIM65Q6PJ69 517 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 GBP6Q6ZN66 633 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 RBM44Q6ZP01 1051 aaKnown RBP6.69□□□□□ -1.34
CD44-221ENST00000526000 B3GNT8Q7Z7M8 397 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 TTC7BQ86TV6 843 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 HID1Q8IV36 788 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 SFTPA2Q8IWL1 248 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 ZNF683Q8IZ20 524 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 PHACTR4Q8IZ21 702 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 FBXO39Q8N4B4 442 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 EMC1Q8N766 993 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 JPH3Q8WXH2 748 aaPredicted RBP6.69□□□□□ -1.34
CD44-221ENST00000526000 EXTL1Q92935 676 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 MED8Q96G25 268 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 PPP1R16AQ96I34 528 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 CFAP57Q96MR6 1250 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 NPY6RQ99463 290 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 CCDC3Q9BQI4 270 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 WRAP53Q9BUR4 548 aaKnown RBP6.69□□□□□ -1.34
CD44-221ENST00000526000 CLPBQ9H078 707 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 CLMPQ9H6B4 373 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 EPB41L5Q9HCM4 733 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 NDFIP2Q9NV92 336 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 EVA1BQ9NVM1 165 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 ANO10Q9NW15 660 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 ASNSD1Q9NWL6 643 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 ARHGEF38Q9NXL2 777 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 SPASTQ9UBP0 616 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 RABGEF1Q9UJ41 708 aa6.69□□□□□ -1.34
CD44-221ENST00000526000 SETXQ7Z333 2677 aaKnown RBP6.68□□□□□ -1.34
CD44-221ENST00000526000 ILVBLA1L0T0 632 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 FAM72CH0Y354 149 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms