RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 ZNF329Q86UD4 541 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 TMPRSS12Q86WS5 348 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 KDM1BQ8NB78 822 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 GLIS1Q8NBF1 620 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 C7orf57Q8NEG2 295 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 ENGASEQ8NFI3 743 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 ADAMTS14Q8WXS8 1223 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 NR4A3Q92570 626 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 KAT2BQ92831 832 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 IQCDQ96DY2 449 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 MCRS1Q96EZ8 462 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 CDCA5Q96FF9 252 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 ZBED3Q96IU2 234 aaPredicted RBP1.9□□□□□ -2.11
CD44-212ENST00000524922 NTPCRQ9BSD7 190 aaKnown RBP1.9□□□□□ -2.11
CD44-212ENST00000524922 COLEC11Q9BWP8 271 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 APOL5Q9BWW9 433 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 FRMD8Q9BZ67 464 aaPredicted RBP1.9□□□□□ -2.11
CD44-212ENST00000524922 PCDHAC1Q9H158 963 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 RMI1Q9H9A7 625 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 BABAM1Q9NWV8 329 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 OBP2AQ9NY56 170 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 PLK2Q9NYY3 685 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 POLKQ9UBT6 870 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 WNT16Q9UBV4 365 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 CNOT7Q9UIV1 285 aaKnown RBP1.9□□□□□ -2.11
CD44-212ENST00000524922 ANAPC4Q9UJX5 808 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 ZMYND8Q9ULU4 1186 aaPredicted RBP1.9□□□□□ -2.11
CD44-212ENST00000524922 DTX4Q9Y2E6 619 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 RAI2Q9Y5P3 530 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 KMT2BQ9UMN6 2715 aaPredicted RBP1.9□□□□□ -2.11
CD44-212ENST00000524922 NCOR2Q9Y618 2525 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 BAHCC1Q9P281 2608 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 ROBO3Q96MS0 1386 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 MED23Q9ULK4 1368 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 CCDC88AQ3V6T2 1871 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 A0A1B0GVT2 93 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 RPS10-NUDT3A0A1W2PQS6 291 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 GAGE12JA6NER3 117 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 M0QYT0 321 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 PCDH17O14917 1159 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 NPC1O15118 1278 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 RNMTO43148 476 aaKnown RBP1.89□□□□□ -2.11
CD44-212ENST00000524922 THAP12O43422 761 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 ZC3H11AO75152 810 aaKnown RBP eCLIP1.89□□□□□ -2.11
CD44-212ENST00000524922 COQ9O75208 318 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 GAS8-AS1O95177 125 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 NTSR2O95665 410 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 NDST3O95803 873 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 KLKB1P03952 638 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 HOXC6P09630 235 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 TGFB3P10600 412 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 TGM2P21980 687 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 MLH1P40692 756 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 SELENOVP59797 346 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 KRTAP10-12P60413 245 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 SHC2P98077 582 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 GRAPQ13588 217 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 TNFAIP1Q13829 316 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 NFATC4Q14934 902 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 RRS1Q15050 365 aaKnown RBP1.89□□□□□ -2.11
CD44-212ENST00000524922 SHBQ15464 509 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 GLE1Q53GS7 698 aaKnown RBP1.89□□□□□ -2.11
CD44-212ENST00000524922 ARHGAP15Q53QZ3 475 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 WASHC2DQ5SRD0 308 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 FKBP1CQ5VVH2 108 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 NADSYN1Q6IA69 706 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 KRTAP5-4Q6L8H1 288 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 PDXDC1Q6P996 788 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 PARM1Q6UWI2 310 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 PPP1R42Q7Z4L9 355 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 ANKRD23Q86SG2 305 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 ANKRD13AQ8IZ07 590 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 ZNF34Q8IZ26 560 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 TTC8Q8TAM2 541 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 GRAPLQ8TC17 118 aaPredicted RBP1.89□□□□□ -2.11
CD44-212ENST00000524922 U2AF1L4Q8WU68 220 aaKnown RBP1.89□□□□□ -2.11
CD44-212ENST00000524922 LPAR1Q92633 364 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 TSR2Q969E8 191 aaKnown RBP1.89□□□□□ -2.11
CD44-212ENST00000524922 TIFAQ96CG3 184 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 LRRC46Q96FV0 321 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 LTV1Q96GA3 475 aaPredicted RBP1.89□□□□□ -2.11
CD44-212ENST00000524922 GUCD1Q96NT3 240 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 WDR77Q9BQA1 342 aaPredicted RBP1.89□□□□□ -2.11
CD44-212ENST00000524922 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 ISCUQ9H1K1 167 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 NUP62CLQ9H1M0 184 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 GGA3Q9NZ52 723 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 TMOD4Q9NZQ9 345 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 KCNG2Q9UJ96 466 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 CORO2BQ9UQ03 480 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 DTNAQ9Y4J8 743 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 PTGDR2Q9Y5Y4 395 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 FAM186AA6NE01 2351 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 REV3LO60673 3130 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 SCN5AQ14524 2016 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 DNAH14Q0VDD8 3507 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 DMDP11532 3685 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 CFAP54Q96N23 3096 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 PTPRZ1P23471 2315 aaPredicted RBP1.89□□□□□ -2.11
CD44-212ENST00000524922 KIF20BQ96Q89 1820 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms