RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 TRPC3Q13507 836 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 CUL3Q13618 768 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 KCNC3Q14003 757 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 UBAP2LQ14157 1087 aaKnown RBP7.97□□□□□ -1.13
SPIDR-223ENST00000524033 MXD4Q14582 209 aaPredicted RBP7.97□□□□□ -1.13
SPIDR-223ENST00000524033 CBX2Q14781 532 aaPredicted RBP7.97□□□□□ -1.13
SPIDR-223ENST00000524033 PCLAFQ15004 111 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 INSCQ1MX18 579 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 LIN52Q52LA3 116 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 ZNF667Q5HYK9 610 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 MDH1BQ5I0G3 518 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 SH3PXD2AQ5TCZ1 1133 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 C1orf146Q5VVC0 180 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 EEF1DP3Q658K8 133 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 ANKRD54Q6NXT1 300 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 HFE2Q6ZVN8 426 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 FAM183BPQ6ZVS7 135 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 TRIM46Q7Z4K8 759 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 CCDC33Q8N5R6 958 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 C1orf127Q8N9H9 656 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 PCDH19Q8TAB3 1148 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 RNF217Q8TC41 542 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 RXFP2Q8WXD0 754 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 SUSD6Q92537 303 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 DTNBP1Q96EV8 351 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 GBP5Q96PP8 586 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 BTBD9Q96Q07 612 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 TBCBQ99426 244 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 ADPGKQ9BRR6 497 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 THTPAQ9BU02 230 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 SNRNP25Q9BV90 132 aaKnown RBP7.97□□□□□ -1.13
SPIDR-223ENST00000524033 APOL5Q9BWW9 433 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 IQCGQ9H095 443 aaKnown RBP7.97□□□□□ -1.13
SPIDR-223ENST00000524033 KLC2Q9H0B6 622 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 CDT1Q9H211 546 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 FZD8Q9H461 694 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 EBF3Q9H4W6 596 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 NRDE2Q9H7Z3 1164 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 MINDY3Q9H8M7 445 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 TBC1D13Q9NVG8 400 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 CPSF2Q9P2I0 782 aaKnown RBP7.97□□□□□ -1.13
SPIDR-223ENST00000524033 TNFSF13BQ9Y275 285 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 DNAJC16Q9Y2G8 782 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 INPP5FQ9Y2H2 1132 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 COL4A4P53420 1690 aaPredicted RBP7.97□□□□□ -1.13
SPIDR-223ENST00000524033 NCOR1O75376 2440 aa7.97□□□□□ -1.13
SPIDR-223ENST00000524033 SCN1AP35498 2009 aa7.96□□□□□ -1.13
SPIDR-223ENST00000524033 MYO15AQ9UKN7 3530 aa7.96□□□□□ -1.13
SPIDR-223ENST00000524033 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.96□□□□□ -1.14
SPIDR-223ENST00000524033 MEIS3P2A8K0S8 358 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 MEI4A8MW99 385 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 M0QYV0 167 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 ACKR2O00590 384 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 KCNN4O15554 427 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 CLASP2O75122 1294 aaKnown RBP7.96□□□□□ -1.14
SPIDR-223ENST00000524033 METTL18O95568 372 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 ZBED1O96006 694 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 CAPNS1P04632 268 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 GALTP07902 379 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 SETSIPP0DME0 302 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 MLNP12872 115 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 CCDC130P13994 396 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 ITGAXP20702 1163 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 ATICP31939 592 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 ARRB2P32121 409 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 ALDH18A1P54886 795 aaKnown RBP7.96□□□□□ -1.14
SPIDR-223ENST00000524033 CREB5Q02930 508 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 KDSRQ06136 332 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 ASPHQ12797 758 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 FRG1Q14331 258 aaKnown RBP7.96□□□□□ -1.14
SPIDR-223ENST00000524033 PDCD2Q16342 344 aaPredicted RBP7.96□□□□□ -1.14
SPIDR-223ENST00000524033 CA9Q16790 459 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 C15orf59Q2T9L4 293 aaPredicted RBP7.96□□□□□ -1.14
SPIDR-223ENST00000524033 CCDC14Q49A88 953 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 PABPC1LQ4VXU2 614 aaKnown RBP7.96□□□□□ -1.14
SPIDR-223ENST00000524033 C4orf17Q53FE4 359 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 FASTKD1Q53R41 847 aaKnown RBP7.96□□□□□ -1.14
SPIDR-223ENST00000524033 FAM102AQ5T9C2 384 aaPredicted RBP7.96□□□□□ -1.14
SPIDR-223ENST00000524033 OGFRL1Q5TC84 451 aaPredicted RBP7.96□□□□□ -1.14
SPIDR-223ENST00000524033 FAXCQ5TGI0 409 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 CES5AQ6NT32 575 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 C16orf46Q6P387 395 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 SYCE2Q6PIF2 218 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 C1orf228Q6PIY5 440 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 UGT2A3Q6UWM9 527 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 LCLAT1Q6UWP7 414 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 OLFML1Q6UWY5 402 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 PACS1Q6VY07 963 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 MRPL10Q7Z7H8 261 aaKnown RBP7.96□□□□□ -1.14
SPIDR-223ENST00000524033 DDX53Q86TM3 631 aaKnown RBP7.96□□□□□ -1.14
SPIDR-223ENST00000524033 ZNF280BQ86YH2 543 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 TICAM1Q8IUC6 712 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 ZBTB8OSQ8IWT0 167 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 CTAGE3PQ8IX95 158 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 NDUFAF2Q8N183 169 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 MPP5Q8N3R9 675 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 RNF149Q8NC42 400 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 GSTCDQ8NEC7 633 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 SLC7A14Q8TBB6 771 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 URGCPQ8TCY9 931 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms