RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 KDELC2Q7Z4H8 507 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 TBC1D1Q86TI0 1168 aaPredicted RBP4.15□□□□□ -1.75
SKP1-212ENST00000523966 PALB2Q86YC2 1186 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.15□□□□□ -1.752e-6■■■□□ 18.1
SKP1-212ENST00000523966 ZDHHC23Q8IYP9 409 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 NANOGP1Q8N7R0 232 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 METTL6Q8TCB7 284 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 ADAMTS15Q8TE58 950 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 DENND1AQ8TEH3 1009 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 TMEM174Q8WUU8 243 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 EME1Q96AY2 570 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 H2AFJQ9BTM1 129 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 RANBP17Q9H2T7 1088 aaKnown RBP4.15□□□□□ -1.75
SKP1-212ENST00000523966 FZD3Q9NPG1 666 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 TRNAU1APQ9NX07 287 aaKnown RBP4.15□□□□□ -1.75
SKP1-212ENST00000523966 TBC1D14Q9P2M4 693 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 SEL1LQ9UBV2 794 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 FBXO2Q9UK22 296 aaPredicted RBP4.15□□□□□ -1.75
SKP1-212ENST00000523966 TDRD9Q8NDG6 1382 aaKnown RBP4.14□□□□□ -1.75
SKP1-212ENST00000523966 A0A0A0MQY5 61 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 TRBV5-7A0A0A0MS05 114 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 SYF2O95926 243 aaKnown RBP4.14□□□□□ -1.75
SKP1-212ENST00000523966 FGBP02675 491 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 MYZAPP0CAP1 466 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 TFPIP10646 304 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 UNGP13051 313 aaPredicted RBP4.14□□□□□ -1.75
SKP1-212ENST00000523966 NFKBIAP25963 317 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 ABCG1P45844 678 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 RXRGP48443 463 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 POLD2P49005 469 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 ALDH7A1P49419 539 aaKnown RBP4.14□□□□□ -1.75
SKP1-212ENST00000523966 SETQ01105 290 aaPredicted RBP4.14□□□□□ -1.75
SKP1-212ENST00000523966 MAMLD1Q13495 774 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 DCTN2Q13561 401 aaKnown RBP4.14□□□□□ -1.75
SKP1-212ENST00000523966 PDE1CQ14123 709 aaPredicted RBP4.14□□□□□ -1.75
SKP1-212ENST00000523966 INPP5JQ15735 1006 aaPredicted RBP4.14□□□□□ -1.75
SKP1-212ENST00000523966 PRICKLE4Q2TBC4 344 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 Q4G0T1 1027 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 ZNF667Q5HYK9 610 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 PAPD7Q5XG87 772 aaKnown RBP4.14□□□□□ -1.75
SKP1-212ENST00000523966 ATG9BQ674R7 924 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 HEPHL1Q6MZM0 1159 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 CES5AQ6NT32 575 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 DPY19L2P1Q6NXN4 242 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 KLHL24Q6TFL4 600 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 SLC46A3Q7Z3Q1 461 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 MRPL10Q7Z7H8 261 aaKnown RBP4.14□□□□□ -1.75
SKP1-212ENST00000523966 TBC1D26Q86UD7 250 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 CNTROBQ8N137 903 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 HORMAD2Q8N7B1 307 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 PLD5Q8N7P1 536 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 PDILTQ8N807 584 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 MPLKIPQ8TAP9 179 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 PIGOQ8TEQ8 1089 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 TMEM170AQ8WVE7 144 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 RNF183Q96D59 192 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 ZC3HAV1LQ96H79 300 aaKnown RBP4.14□□□□□ -1.75
SKP1-212ENST00000523966 SIN3AQ96ST3 1273 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 B3GNT4Q9C0J1 378 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 PRKRIP1Q9H875 184 aaPredicted RBP4.14□□□□□ -1.75
SKP1-212ENST00000523966 PLEKHA5Q9HAU0 1116 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 SPAG4Q9NPE6 437 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 PCDHB16Q9NRJ7 776 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 TUBA8Q9NY65 449 aaPredicted RBP4.14□□□□□ -1.75
SKP1-212ENST00000523966 PLEKHB1Q9UF11 243 aaPredicted RBP4.14□□□□□ -1.75
SKP1-212ENST00000523966 COG5Q9UP83 839 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 FAM96BQ9Y3D0 163 aa4.14□□□□□ -1.75
SKP1-212ENST00000523966 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.13□□□□□ -1.75
SKP1-212ENST00000523966 PGPEP1LA6NFU8 196 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 STMND1H3BQB6 276 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 HSPB6O14558 160 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 HNRNPCL1O60812 293 aaKnown RBP4.13□□□□□ -1.75
SKP1-212ENST00000523966 RNASEH2AO75792 299 aaKnown RBP4.13□□□□□ -1.75
SKP1-212ENST00000523966 SEC14L2O76054 403 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 TMEM191BP0C7N4 346 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 CHRNB1P11230 501 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 CAPN3P20807 821 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 TNFSF8P32971 234 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 CPOXP36551 454 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 GABRB2P47870 512 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 ME1P48163 572 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 GNAQP50148 359 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 HDAC4P56524 1084 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 TMPRSS3P57727 454 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 RPL7AP62424 266 aaKnown RBP4.13□□□□□ -1.75
SKP1-212ENST00000523966 ITGADQ13349 1161 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 MTX1Q13505 466 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 TBCEQ15813 527 aaPredicted RBP4.13□□□□□ -1.75
SKP1-212ENST00000523966 CCNG2Q16589 344 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 C10orf25Q5T742 122 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 ZNF626Q68DY1 528 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 ITPRIPL1Q6GPH6 555 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 MZT2BQ6NZ67 158 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 KIAA2013Q8IYS2 634 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 CADM4Q8NFZ8 388 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 C16orf52Q8NHV5 167 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 KCNG4Q8TDN1 519 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 LPAR1Q92633 364 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 BBS4Q96RK4 519 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 GFM1Q96RP9 751 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms