RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 HNRNPDQ14103 355 aaKnown RBP12.12□□□□□ -0.47
PVT1-215ENST00000522963 LBRQ14739 615 aaKnown RBP12.12□□□□□ -0.47
PVT1-215ENST00000522963 KCTD19Q17RG1 926 aaPredicted RBP12.12□□□□□ -0.47
PVT1-215ENST00000522963 INO80DQ53TQ3 878 aaPredicted RBP12.12□□□□□ -0.47
PVT1-215ENST00000522963 CCDC137Q6PK04 289 aaKnown RBP12.12□□□□□ -0.47
PVT1-215ENST00000522963 KIAA1324Q6UXG2 1013 aaKnown RBP12.12□□□□□ -0.47
PVT1-215ENST00000522963 ASCL5Q7RTU5 278 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 CACUL1Q86Y37 369 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 SH2D3CQ8N5H7 860 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 TEX26Q8N6G2 289 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 ATP11CQ8NB49 1132 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 ATL2Q8NHH9 583 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 NSMCE1Q8WV22 266 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 RLN3Q8WXF3 142 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 NELL1Q92832 810 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 IL12RB2Q99665 862 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 CEP41Q9BYV8 373 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 SLC6A17Q9H1V8 727 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 HS3ST2Q9Y278 367 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 FCF1Q9Y324 198 aaKnown RBP12.12□□□□□ -0.47
PVT1-215ENST00000522963 RALGAPA1Q6GYQ0 2036 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 GON4LQ3T8J9 2241 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 PTPRZ1P23471 2315 aaPredicted RBP12.11□□□□□ -0.47
PVT1-215ENST00000522963 THADAQ6YHU6 1953 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 A0A1W2PQF6 199 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 CFAP69A5D8W1 941 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 TTC34A8MYJ7 566 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 RNF103O00237 685 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 MUSKO15146 869 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 MTSS1O43312 755 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 ATP9BO43861 1147 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 GFRA3O60609 400 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 LILRB5O75023 590 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 ZNF821O75541 412 aaPredicted RBP12.11□□□□□ -0.47
PVT1-215ENST00000522963 GABRG2P18507 467 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 PTGIRP43119 386 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 MMP13P45452 471 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 RENBPP51606 427 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 RFTN1Q14699 578 aaPredicted RBP12.11□□□□□ -0.47
PVT1-215ENST00000522963 E2F5Q15329 346 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 USP39Q53GS9 565 aaKnown RBP12.11□□□□□ -0.47
PVT1-215ENST00000522963 TEX44Q53QW1 395 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 MARC1Q5VT66 337 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 PRUNE1Q86TP1 453 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 ZNF567Q8N184 647 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 PGBD5Q8N414 524 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 CNTD1Q8N815 330 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 CEP112Q8N8E3 955 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 GLIS1Q8NBF1 620 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 MNS1Q8NEH6 495 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 CASKIN2Q8WXE0 1202 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 RTP4Q96DX8 246 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 CCDC114Q96M63 670 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 KRT12Q99456 494 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 GABRG3Q99928 467 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 MTG2Q9H4K7 406 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 NT5MQ9NPB1 228 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 RBM22Q9NW64 420 aaKnown RBP eCLIP12.11□□□□□ -0.47
PVT1-215ENST00000522963 LHX3Q9UBR4 397 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 SEPT3Q9UH03 358 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 PCYOX1Q9UHG3 505 aa12.11□□□□□ -0.47
PVT1-215ENST00000522963 SMG5Q9UPR3 1016 aaKnown RBP12.11□□□□□ -0.47
PVT1-215ENST00000522963 RIF1Q5UIP0 2472 aaKnown RBP12.11□□□□□ -0.47
PVT1-215ENST00000522963 ZFHX2Q9C0A1 2572 aaPredicted RBP12.1□□□□□ -0.47
PVT1-215ENST00000522963 CTAGE15A4D2H0 777 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 PRR23AA6NEV1 266 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 C5orf60A6NFR6 353 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 PROB1E7EW31 1015 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 NPC1O15118 1278 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 MAP3K13O43283 966 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 ZNF189O75820 626 aaPredicted RBP12.1□□□□□ -0.47
PVT1-215ENST00000522963 IFNB1P01574 187 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 HLA-DQB2P05538 268 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 ZSCAN5DPP0CG00 497 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 CTAGE8P0CG41 777 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 ETS1P14921 441 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 STIP1P31948 543 aaKnown RBP12.1□□□□□ -0.47
PVT1-215ENST00000522963 CD68P34810 354 aaPredicted RBP12.1□□□□□ -0.47
PVT1-215ENST00000522963 RGRP47804 291 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 ZNF235Q14590 738 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 DLG2Q15700 870 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 C22orf39Q6P5X5 142 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 GSTA5Q7RTV2 222 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 CTAGE6Q86UF2 777 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 RASSF3Q86WH2 238 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 CTAGE4Q8IX94 777 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 KDM1BQ8NB78 822 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 TSEN2Q8NCE0 465 aaKnown RBP12.1□□□□□ -0.47
PVT1-215ENST00000522963 LRRN4CLQ8ND94 238 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 CCDC110Q8TBZ0 833 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 FRS2Q8WU20 508 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 GAB3Q8WWW8 586 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 TEKT5Q96M29 485 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 SPATA13Q96N96 652 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 AGAP3Q96P47 875 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 VAT1Q99536 393 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 FERMT1Q9BQL6 677 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 CINPQ9BW66 212 aaPredicted RBP12.1□□□□□ -0.47
PVT1-215ENST00000522963 TNKS2Q9H2K2 1166 aa12.1□□□□□ -0.47
PVT1-215ENST00000522963 TMEM245Q9H330 911 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms