RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 C16orf72Q14CZ0 275 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 DBN1Q16643 649 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 EIF2S3LQ2VIR3 472 aaKnown RBP9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 CRTC2Q53ET0 693 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 PRRT3Q5FWE3 981 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 BSPRYQ5W0U4 402 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 EPM2AIP1Q7L775 607 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 ANKMY2Q8IV38 441 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 SLITRK4Q8IW52 837 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 ARHGAP18Q8N392 663 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 HJURPQ8NCD3 748 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 PARD3BQ8TEW8 1205 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 TMEM74Q96NL1 305 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 CATSPER2Q96P56 530 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 CPEB1Q9BZB8 566 aaKnown RBP9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 ULBP1Q9BZM6 244 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 UBXN6Q9BZV1 441 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 B3GNT4Q9C0J1 378 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 APOBEC3GQ9HC16 384 aaKnown RBP9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 PANK4Q9NVE7 773 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 ERRFI1Q9UJM3 462 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 VPS4AQ9UN37 437 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 NAALADL1Q9UQQ1 740 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 A0A1B0GTL3 188 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 STMND1H3BQB6 276 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 LUC7L3O95232 432 aaKnown RBP9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 ASS1P00966 412 aaKnown RBP9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 PDGFAP04085 211 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 PFN3P60673 137 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 PSMA6P60900 246 aaKnown RBP9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 DLG4P78352 724 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 HMGN5P82970 282 aaKnown RBP9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 BIRC3Q13489 604 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 PDE1CQ14123 709 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 DCAF6Q58WW2 860 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 MS4A13Q5J8X5 152 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 ATP1A1-AS1Q5TC04 95 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 FAM46CQ5VWP2 391 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 CENPQQ7L2Z9 268 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 ZC3H18Q86VM9 953 aaKnown RBP9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 HEATR4Q86WZ0 1026 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 SFTPA2Q8IWL1 248 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 ZNF295-AS1Q8N0V1 137 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 XXYLT1Q8NBI6 393 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 ZNF507Q8TCN5 953 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 OR8D1Q8WZ84 308 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 AZIN2Q96A70 460 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 ALG14Q96F25 216 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 SLC45A3Q96JT2 553 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 NT5C1AQ9BXI3 368 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 SLC17A9Q9BYT1 436 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 CDH19Q9H159 772 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 SEMA6CQ9H3T2 930 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 CASS4Q9NQ75 786 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 SPASTQ9UBP0 616 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 GULP1Q9UBP9 304 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 XPO7Q9UIA9 1087 aaKnown RBP9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 RNF215Q9Y6U7 377 aa9.08□□□□□ -0.96
TRAPPC9-212ENST00000521944 SERTM1A2A2V5 107 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 FAM181BA6NEQ2 426 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 PRKAR1AP10644 381 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 FGF3P11487 239 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 NOS2P35228 1153 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 RABIFP47224 123 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 DPYDQ12882 1025 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 MRPL49Q13405 166 aaKnown RBP9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 CDH18Q13634 790 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 DLG2Q15700 870 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 SGSM1Q2NKQ1 1148 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 DEFB109BQ30KR1 87 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 ZACNQ401N2 412 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 C1orf220Q5T0J3 134 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 MSANTD2Q6P1R3 559 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 FIGNL1Q6PIW4 674 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 SV2BQ7L1I2 683 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 ARL10Q8N8L6 244 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 ZNF557Q8N988 423 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 TEX19Q8NA77 164 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 FAM184AQ8NB25 1140 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 TSEN2Q8NCE0 465 aaKnown RBP9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 OR52K2Q8NGK3 314 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 RASSF8Q8NHQ8 419 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 CPT1CQ8TCG5 803 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 APOBEC4Q8WW27 367 aaKnown RBP9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 GTPBP3Q969Y2 492 aaKnown RBP9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 TMEM159Q96B96 161 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 FCRL2Q96LA5 508 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 CMKLR1Q99788 373 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 SPRY4Q9C004 299 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 PRDM8Q9NQV8 689 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 OLA1Q9NTK5 396 aaKnown RBP9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 SIRPGQ9P1W8 387 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 STK17AQ9UEE5 414 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 APOBEC3BQ9UH17 382 aaKnown RBP9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 ZNF232Q9UNY5 417 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 LIMCH1Q9UPQ0 1083 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 CEP83Q9Y592 693 aa9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 GPC6Q9Y625 555 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC9-212ENST00000521944 PKDREJQ9NTG1 2253 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 ZNF891A8MT65 544 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms